Pairwise Alignments

Query, 883 a.a., DNA mismatch repair protein, MutS family from Agrobacterium fabrum C58

Subject, 876 a.a., DNA mismatch repair protein MutS from Marinobacter adhaerens HP15

 Score =  566 bits (1459), Expect = e-165
 Identities = 355/898 (39%), Positives = 511/898 (56%), Gaps = 51/898 (5%)

Query: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP 60
           MM+QY++IK  +P  L+FYRMGDFYELF++DA +A+  + ITLT RGQ  G+ IPM G+P
Sbjct: 14  MMQQYLKIKGQHPNELVFYRMGDFYELFYEDAKKAAELMDITLTARGQSGGNPIPMAGIP 73

Query: 61  VHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP 120
            H+++ Y+ +L+  G  +A+CEQI DPA      SK  V R VVR+VTPGTL+++  L  
Sbjct: 74  YHSSEGYIARLVRAGQSIAICEQIGDPAT-----SKGPVDRQVVRIVTPGTLSDDAYLED 128

Query: 121 TESNYLMALARIRGSAEAQFALAWIDISTGVFRLAET-TLTRLLADIWRIDPRELIVADS 179
              N L+A+   R     QF  A +DIS+G F ++E   L  L  ++ R+ P E+++++ 
Sbjct: 129 RRDNLLVAIYNHR----EQFGFASLDISSGRFAVSELENLEALQGELQRLRPAEILISED 184

Query: 180 LFHDEELRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFS-RVEMAAAA 238
            F  E++   F  + R    Q   LF+S  A   I     V  L GFG     + + AA 
Sbjct: 185 -FPYEDVLEGFTGIRR----QGPWLFESDTARRVITHQLQVRDLTGFGCEELNLAVCAAG 239

Query: 239 AAVAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLHALNRT 298
             + Y ++TQ    P +    RE     + +D A+R NLE+   L G    +L   ++RT
Sbjct: 240 CLLQYAKETQRTALPHIRKLTRERRDEAVILDAASRRNLEIDTNLMGGHQYTLAWVMDRT 299

Query: 299 VTGGGARLLAERLMSPLTDPERINARLDAVAYLIDDVSLCDGLRDALKHVADMPRALSRL 358
            T  G R L   L  PL D E +  R  AV+ L+D     + + D LK V D+ R L+R+
Sbjct: 300 ATSMGGRELRRWLNRPLRDVEIVRQRQQAVSALLDGFHY-EPVHDLLKAVGDIERVLARV 358

Query: 359 ALERGGPRDLGAIRQGLVSAEKIAVILDGGLLPDELAKALRDLKALPGA---LEAMLGSM 415
           AL    PRDL  +R    +       L   L P      +R L  + G    L  +L   
Sbjct: 359 ALRSARPRDLARLRDAFQALPD----LQETLKPVNSHHVVR-LATIIGEYPELADLLERA 413

Query: 416 LADDLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLKIKHNNV 475
           + D+ P++ R+GG +REG + ELDE+R + + + + +  ++ +  D TGI +LK+ +N V
Sbjct: 414 IIDNPPVVIREGGVIREGFDEELDELRNISENAGQYLLDVETRERDRTGISTLKVGYNRV 473

Query: 476 LGYFIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTME 535
            GY+IE++   +D      +A   +I RQT+  A RF T EL + E +  +A + AL  E
Sbjct: 474 HGYYIEISRAQSD------QAPVDYIRRQTLKNAERFITPELKEFEDKALSAKSRALARE 527

Query: 536 LEAFERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKGGR 595
              ++ ++E V  Q   ++  A ALA +DV S+ A  AT   +  P    S  F I+ GR
Sbjct: 528 KGLYDDVLETVAGQLAPLQDAAQALAELDVLSNFAERATSLRFSAPEFSESPGFDIEEGR 587

Query: 596 HPVVEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQ 655
           HPVVEQ L      PF+ N+  +          + ++TGPNMGGKST++RQ ALIA+LA 
Sbjct: 588 HPVVEQLLDE----PFVPNDLLMDTQR-----RMLVITGPNMGGKSTYMRQAALIALLAY 638

Query: 656 IGSFVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEI 715
            GSFVPA  A IG VDR+F+R+G+SDD+A GRSTFMVEM ETA IL+ AT+ SLV++DE+
Sbjct: 639 TGSFVPANRAVIGPVDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATEHSLVLMDEV 698

Query: 716 GRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWEGD 775
           GRGT+TFDGLS+AWA  EHL    RC  LFATH+ ELT L+++L    N  +   E +  
Sbjct: 699 GRGTSTFDGLSLAWATAEHLAREIRCYTLFATHYFELTQLADELQHAVNVHLTATEHDDS 758

Query: 776 VIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLE-DADRKNPASQLID---D 831
           ++FLH V  G A +SYG+QVA+LAG+P  V+  A+  L+ LE  A    PA+   +   +
Sbjct: 759 IVFLHNVHDGPASQSYGLQVAKLAGVPQDVIRNAKTQLSHLEGSASPAAPAASAAEQGNN 818

Query: 832 LPLFQIAVRREETRKAG-------PSKVEEALKSFNPDEMTPREALDALYALKKELGK 882
             L + A +  E+   G       PS VEEALK  + D +TPR+A++ LY LK  + K
Sbjct: 819 ASLAKPATKVNESVYQGDMFASLEPSAVEEALKDMDLDGLTPRDAMNQLYELKALMKK 876