Pairwise Alignments

Query, 883 a.a., DNA mismatch repair protein, MutS family from Agrobacterium fabrum C58

Subject, 880 a.a., DNA mismatch repair protein MutS from Ralstonia sp. UNC404CL21Col

 Score =  561 bits (1447), Expect = e-164
 Identities = 356/887 (40%), Positives = 504/887 (56%), Gaps = 47/887 (5%)

Query: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP 60
           MM+QY+ +KA +P +L+FYRMGDFYELFF+DA +ASR L ITLT RG   GH I M G+P
Sbjct: 24  MMQQYLRLKAGHPDTLVFYRMGDFYELFFEDAEKASRLLDITLTARGSSNGHPIRMAGIP 83

Query: 61  VHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP 120
            HAA+ YL KL+  G  VA+CEQI DPA      +K  V+R VVR+VTPGTLT+  LLS 
Sbjct: 84  FHAAEQYLAKLVKLGESVAICEQIGDPAT-----TKGPVERKVVRVVTPGTLTDAALLSD 138

Query: 121 TESNYLMALARIRGSAEAQ--FALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVAD 178
             +N+L+A+A + G   A     LAW+++  G  R+ E +  +L  ++ RI P E++  D
Sbjct: 139 KVNNHLLAIAHLPGKRGAAPLMGLAWLNLVGGELRVMECSPDQLDRELERIRPAEVLADD 198

Query: 179 SLFHDEELRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFS-RVEMAAA 237
           +  +  ++      + R  +P     FD      R+     V++L  FG  +    +AAA
Sbjct: 199 ATLNTLQVD-----VARTRLPDWH--FDVEAGTRRLREQLGVASLVAFGAETLTAALAAA 251

Query: 238 AAAVAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLHALNR 297
            A + Y   TQ      +     E  +  + +D ATR NLEL +TL G    +L   L+ 
Sbjct: 252 GALLNYAAATQGQSLRHVIGLTVEHESEFIGLDTATRRNLELTETLRGQESPTLFSLLDT 311

Query: 298 TVTGGGARLLAERLMSPLTDPERINARLDAVAYLIDDVSLCDGLRDALKHVADMPRALSR 357
             T  G+RLL   L  PL D     AR  A+  L+   S    LR  L+ ++D+ R   R
Sbjct: 312 CATSMGSRLLRHWLHHPLRDRAVPQARQQAIEVLLG--SDWQTLRATLRTLSDVERITGR 369

Query: 358 LALERGGPRDLGAIRQGLVSAEKIAVIL---DGGLLPDELAKALRDLKALPGALEAMLGS 414
           LAL    PRDL ++R  L    +I   L   D   L  EL  AL    +LP    A+L  
Sbjct: 370 LALLSARPRDLSSLRDTLARLPEIREELPQSDAAPLLTELYAAL----SLPEDAHALLQR 425

Query: 415 MLADDLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLKIKHNN 474
            +  +   + RDGG +  G + +LDE+R + +   + +  L+ +  + TGI +L++++N 
Sbjct: 426 AVMAEPAAMVRDGGVIARGYDADLDELRDISENCGQFLVDLEARERERTGIANLRVEYNR 485

Query: 475 VLGYFIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTM 534
           V G++IEVT G A       +    +  RQT+  A R+ T EL   E +  +A   AL+ 
Sbjct: 486 VHGFYIEVTNGQAA------KVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALSR 539

Query: 535 ELEAFERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKGG 594
           E   +E +++ ++      K  A ALA  DV ++LA  A   ++ RP +  +    +   
Sbjct: 540 EKVLYEELLQKLLPHLAEFKRIAAALAQADVLATLAERAHALSWSRPTLTDAPGIELTRA 599

Query: 595 RHPVVEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAILA 654
           RHPVVEQ + +     F+AN+C L          + L+TGPNMGGKSTF+RQ AL+ +LA
Sbjct: 600 RHPVVEQQVEQ-----FVANDCMLQEAR-----KLLLITGPNMGGKSTFMRQTALVVLLA 649

Query: 655 QIGSFVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDE 714
            +G+FVPAEAA IG +DR+F+R+GA+DDLA GRSTFMVEM E AAIL++AT  SLV++DE
Sbjct: 650 YVGAFVPAEAAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLMDE 709

Query: 715 IGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWEG 774
           IGRGT+TFDGL++AWA   HL   NR   LFATH+ ELT L ++  + +N  +   E   
Sbjct: 710 IGRGTSTFDGLALAWAIARHLLSHNRSHTLFATHYFELTQLPQEFAQAANVHLSAVEHGD 769

Query: 775 DVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDDLPL 834
            ++FLH V  G A +SYG+QVA+LAG+P  V+  AR+ L  LE       A+  +D   L
Sbjct: 770 GIVFLHAVQEGPASQSYGLQVAQLAGVPQPVIRAARKRLAWLEQHSADTGATPQLD---L 826

Query: 835 FQIA----VRREETRKAGPSKVEEALKSFNPDEMTPREALDALYALK 877
           F +A    +  E+   A  S + EAL   +PD+MTPREALDALY LK
Sbjct: 827 FALAADTPIDDEDEADAPDSALTEALAGIDPDDMTPREALDALYRLK 873