Pairwise Alignments

Query, 883 a.a., DNA mismatch repair protein, MutS family from Agrobacterium fabrum C58

Subject, 894 a.a., DNA mismatch repair protein MutS from Burkholderia phytofirmans PsJN

 Score =  569 bits (1467), Expect = e-166
 Identities = 354/892 (39%), Positives = 505/892 (56%), Gaps = 41/892 (4%)

Query: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP 60
           MM+QY+ IKA++PG+L+FYRMGDFYELFF+DA +A+R L +TLT+RG   G+ I M GVP
Sbjct: 17  MMQQYLRIKADHPGTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGNPIKMAGVP 76

Query: 61  VHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP 120
            HA + YL KL+  G  VA+CEQI DPA      SK  V+R VVR+VTPGTLT+  LLS 
Sbjct: 77  HHAVEQYLAKLVKLGESVAICEQIGDPAT-----SKGPVERKVVRVVTPGTLTDAALLSD 131

Query: 121 TESNYLMAL--ARIRGSAEAQFALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVAD 178
               YL+A+  A  R        LAW+++++G  RLAE    ++ A + RI P E++VAD
Sbjct: 132 KSDVYLLAMCVAHNRRGVATSVGLAWLNLASGALRLAEVAPDQVAAALERIRPAEILVAD 191

Query: 179 SLFHDEELRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFSRV-EMAAA 237
           +        P  +      VP     FD      R+     V+ LDGFG  S      AA
Sbjct: 192 TPSDSASWTPPVNAGALTRVP--VWHFDVTSGTQRLCDQLEVAGLDGFGAHSLTCACGAA 249

Query: 238 AAAVAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLHALNR 297
            A + Y   TQ  +   + + + E  +  + +DPATR NLEL +TL G    +L   L+ 
Sbjct: 250 GALLLYAAATQGQQLRHVRSLKVEYESEYIGLDPATRRNLELTETLRGTESPTLCSLLDT 309

Query: 298 TVTGGGARLLAERLMSPLTDPERINARLDAVAYLIDDV--SLCDGLRDALKHVADMPRAL 355
             T  G+RLL   L  P  +     AR  A+  L+D    +  D LR AL+ ++D+ R  
Sbjct: 310 CCTTMGSRLLRHWLHHPPRESAVAQARQQAIGALLDAPPGASIDSLRGALRQISDIERIT 369

Query: 356 SRLALERGGPRDLGAIRQGLVSAEKIAVILDGGLLP--DELAKALRDLKALPGALEAMLG 413
            RLAL    PRDL ++R   ++  ++   +   + P  D LA+    L+  P A   +L 
Sbjct: 370 GRLALLSARPRDLSSLRDTFIALPELRTQV-AAVAPNADSLARIDASLEP-PQACVELLK 427

Query: 414 SMLADDLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLKIKHN 473
             +A +   + RDGG +  G + ELDE+R + +   + +  L+ +    TGI +L++++N
Sbjct: 428 RAVAQEPSAMVRDGGVIARGYDAELDELRDISENCGQFLIDLETRERARTGIGNLRVEYN 487

Query: 474 NVLGYFIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALT 533
            V G++IEVT G       TD+    +  RQT+  A R+ T EL   E +  +A   AL 
Sbjct: 488 KVHGFYIEVTRGQ------TDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALA 541

Query: 534 MELEAFERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKG 593
            E   ++ +++A++      +  A ALA +D+ ++    A    +  P   A+    I+ 
Sbjct: 542 RERSLYDALLQALLPFIPDCQRVASALAELDLLAAFGERARALDWVAPTFSANAGIEIEQ 601

Query: 594 GRHPVVEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAIL 653
           GRHPVVE  + +     FIAN+C L+         + L+TGPNMGGKSTF+RQ ALIA+L
Sbjct: 602 GRHPVVEAQVEQ-----FIANDCSLTPER-----KLLLITGPNMGGKSTFMRQTALIALL 651

Query: 654 AQIGSFVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILD 713
           A +GS+VPA  A  G +DR+F+R+GA+DDLA GRSTFMVEM E AAILN AT +SLV++D
Sbjct: 652 AYVGSYVPARRAAFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMD 711

Query: 714 EIGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWE 773
           EIGRGT+TFDGL++AWA   HL   N C  LFATH+ ELT L  +  + +N  +   E  
Sbjct: 712 EIGRGTSTFDGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPQAANVHLSAVEHG 771

Query: 774 GDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQL---ID 830
             ++FLH V  G A++SYG+QVA+LAG+P +V+  AR+ L  LE      PA QL     
Sbjct: 772 HGIVFLHAVSEGPANQSYGLQVAQLAGVPNAVIRAARKHLAHLEQQSAAQPAPQLDLFAT 831

Query: 831 DLPLFQIAVRREETRKAGPS------KVEEALKSFNPDEMTPREALDALYAL 876
            +P+       E   KA P+      ++ E L+  +P+++ PREALD LY L
Sbjct: 832 PMPMLLEDADDERDAKAEPAVPPAMQELVERLRGIDPNDLRPREALDLLYEL 883