Pairwise Alignments

Query, 746 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  219 bits (558), Expect = 5e-61
 Identities = 156/541 (28%), Positives = 273/541 (50%), Gaps = 51/541 (9%)

Query: 206 SSIARDVTEERLALAEREDARLRAEKADAEKARLLATVSHEIRLPLSGMLGMNHLLSQTK 265
           S +   + +  +   E + A+ RA++A   K+  LA +SHE+R PL+G++G    + +T+
Sbjct: 261 SDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQ 320

Query: 266 LNQEQRNYLDGMKQSGQSLVQLVEDLLDYSTMEAGRFRLNPRAENLRRLIESIVEMLAHR 325
           L   Q +YL  +++S  +L+ ++ D+LD+S +EAG+  L       + ++E +V + A  
Sbjct: 321 LTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATS 380

Query: 326 AHEKGIEIASFVTPDVPDYLDFDPARLRQVLFNLIGNAVKFTQVGGV-------VIRARM 378
           AHEKG+EI   + P +P  +  DP R++QVL NL+GN++KFT+ G +        +R  +
Sbjct: 381 AHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDV 440

Query: 379 VDGELQITVEDTGPGMSEAEQARIFGEFEQA-GPLSQRSAGTGLGLAISARIVREFGGNL 437
           +D  LQ  V DTG G+SE +QA++F  F QA   +S+R  GTGLGL I+ ++V   GG +
Sbjct: 441 ID--LQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEI 498

Query: 438 TVSSRRGEGSTFKLVFRPGRAPAEMPDSGRSHCLQHTNVLLIAPEGVAAAVTMEAIEAFG 497
           +++SR  +GSTF    R       + D   +  L H ++LLI P   AAA+  + +   G
Sbjct: 499 SLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSG 558

Query: 498 GKCILIHQPEDLDRLRNEPVSRTADLTD-IIVDLRISALFRDALRD-WPQQTIRRT---L 552
                      L+      +     + D ++++L  S      L + W Q+ +  T   +
Sbjct: 559 -----------LEVTYRSAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHNVI 607

Query: 553 LVSPEERASTTHASFDAW----LIRPLREKSLIDVLCGRLRGIERRDAINDNHPDVGFSS 608
           +  P    +        +    + +PL  K L+  L  +              P +  +S
Sbjct: 608 VGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTLAAQ-------------QPQLANTS 654

Query: 609 RVVERASGVE--ILVAEDDAVNARIIRAVL-EKSGYIVRAVDNFQALQQSVASGASRLPN 665
               +A  +   ++  +D+  N ++I A+L E+  Y+V      +A++Q+     SR  +
Sbjct: 655 LPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQA----QSRQFD 710

Query: 666 LIVSDLNMPGGEGLDVLPDLLGKLKDERNIPVIILSGDAGAGTAEILLKAGAGAVLAKPA 725
           +I+ D+ MP  +G+      + +LK  R+ PVI ++  A AG  + LLKAG    L KP 
Sbjct: 711 IILMDIQMPHMDGVTAC-KAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPI 769

Query: 726 D 726
           +
Sbjct: 770 E 770