Pairwise Alignments

Query, 286 a.a., rRNA methylase from Agrobacterium fabrum C58

Subject, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

 Score = 66.6 bits (161), Expect = 5e-16
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 135 IALDRVRDPGNLGTIIRTADAAGASGVILVGDCTDPFSLETVRATMGSVFATPVAR-ASV 193
           + LD V DP NLG  +R ADAAG + VI+  D + P +    +   G+    P+ R  ++
Sbjct: 99  LVLDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNL 158

Query: 194 EEFLSWKKSAHVSVVATHLAGSVDYRKIDYAGKPVVILMGNEQSGLPPELAGKADQLARI 253
              +   +   V  V T    + D  +    G  + I+MG E  G+        D L +I
Sbjct: 159 ARTMRALQEKGVWFVGTAGEATHDIYQSKLTGS-LAIVMGAEGDGMRRLTRETCDDLIKI 217

Query: 254 PQQGRADSLNLAIATAVMLFEARR 277
           P  G   SLN+++A  V LFEA R
Sbjct: 218 PMAGSVSSLNVSVACGVCLFEAVR 241