Pairwise Alignments

Query, 286 a.a., rRNA methylase from Agrobacterium fabrum C58

Subject, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (250), Expect = 3e-26
 Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 34/271 (12%)

Query: 16  VKEVTSLANPIIKDIKALTQKKGREETGTFMAEGLKLVIDALELGWTIKTLV-------- 67
           + + T ++   +K I+AL QKK R+  G F+ +G K V++       ++ +         
Sbjct: 9   ISDSTMISKTQLKLIRALGQKKQRKAHGLFLVQGEKNVLELTNSTLKVQHIFATAEFLAE 68

Query: 68  YAKAAKGKPLVEQAAVKTVASGGLVLEVSEKVIASITRRDNPQMVVGIFEQKWKPLKDIR 127
           +A+A  G   +E           LV   +   + +I     P + V              
Sbjct: 69  HAQALAGFECIEATLDDLTKVSTLVSNNAAIAVVAI-----PHIEV-------------- 109

Query: 128 PEKGETYIALDRVRDPGNLGTIIRTADAAGASGVILVGDCTDPFSLETVRATMGSVFATP 187
           P+     IALD V DPGNLGTIIR AD  G S +I   DC DP++ +T+ ATMGS     
Sbjct: 110 PKAQGLMIALDGVSDPGNLGTIIRVADWYGISHIIASQDCADPYNPKTISATMGSFGRVQ 169

Query: 188 VARASVEEFLSWKKSAHVSVVATHLAG-SVDYRKIDYAGKPVVILMGNEQSGLPPELAGK 246
           V++  + ++L+    A++ V    L G SV        G   ++LMG+E  G+  + A  
Sbjct: 170 VSQVDLPDYLA---KANLPVYGAFLEGVSVHQTAFQAEG---ILLMGSESHGIREQAAQY 223

Query: 247 ADQLARIPQQGRADSLNLAIATAVMLFEARR 277
                 IP  G A+SLN+A+AT ++L   RR
Sbjct: 224 VTDKITIPAFGGAESLNVAMATGIILDNIRR 254