Pairwise Alignments

Query, 286 a.a., rRNA methylase from Agrobacterium fabrum C58

Subject, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 7/184 (3%)

Query: 95  VSEKVIASITRRDNPQMVVGIFEQKWKPLKDIRPEKGET----YIALDRVRDPGNLGTII 150
           V  +V+  +    +  +V  +FE  +  L D+  +  +      IALD+V+DPGN GT+ 
Sbjct: 56  VEGQVLDKLYAGGHQGVVARLFEAGYVELDDLLQDAPDAPLPLIIALDQVQDPGNAGTLA 115

Query: 151 RTADAAGASGVILVGDCTDPFSLETVRATMGSVFATPVAR-ASVEEFLSWKKSAHVSVVA 209
           R+  A G +G+I+             RA  G++   PVAR A++   L     A  ++  
Sbjct: 116 RSLYALGGAGLIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYG 175

Query: 210 THLA-GSVDYRKIDYAGKPVVILMGNEQSGLPPELAGKADQLARIPQQGRADSLNLAIAT 268
                GSV+         P V+++GNE  G+ P +A + D L  IP     DS N+A A 
Sbjct: 176 AMCGEGSVNAFTATLR-TPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAG 234

Query: 269 AVML 272
           A++L
Sbjct: 235 ALLL 238