Pairwise Alignments

Query, 190 a.a., sigma-54 modulation protein from Agrobacterium fabrum C58

Subject, 187 a.a., putative sigma(54) modulation protein from Phaeobacter inhibens DSM 17395

 Score =  147 bits (370), Expect = 1e-40
 Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 4/187 (2%)

Query: 1   MSVRVSGKHMEIGESFRQRIEDNIGLAVTKYFDGGYSGQVTVEKSGSRFAADCKLHLDTG 60
           M  ++SGK ++IGE+ +  ++  +G AV KY +      V   +S   +  +  +HL TG
Sbjct: 1   MRYQISGKQIDIGEALQSHVQSELGAAVAKYAERPTDANVVFSRSAHEYVCETTVHLSTG 60

Query: 61  VVLHAAGQANDPQASFDAAAERIEKRLRRYKRKLKDHHSGSNGALPEIAYTVMDAVPDED 120
           +   A   A +  A+F+A  E++EK+LRRYKR+LKDHH   +  + E++      +  ED
Sbjct: 61  LTAQAKAHATEIYAAFEACCEKMEKQLRRYKRRLKDHHRDRSEPV-ELSGASSYILASED 119

Query: 121 ---HEVPEDYAPTIVAESSKQIKTMSVASAVMALDMTDEPVLLFRSPGKEYLNIVYRRHD 177
                 PE   P IVAE   QI ++SV  AVM +++   PVL+FR  GK+ LN+VYRR D
Sbjct: 120 AGTESEPESLQPIIVAEMETQIPSLSVGEAVMQMELAGAPVLVFRKEGKDGLNVVYRRED 179

Query: 178 GNIGWID 184
           GNIGWID
Sbjct: 180 GNIGWID 186