Pairwise Alignments

Query, 190 a.a., sigma-54 modulation protein from Agrobacterium fabrum C58

Subject, 95 a.a., ribosomal subunit interface protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 42.0 bits (97), Expect = 3e-09
 Identities = 24/97 (24%), Positives = 52/97 (53%), Gaps = 2/97 (2%)

Query: 1  MSVRVSGKHMEIGESFRQRIEDNIGLAVTKYFDGGYSGQVTVEKSGSRFAADCKLHLDTG 60
          M + +SG H+EI ES R  +E+     + ++F+   +  V +     +  A+ +++L TG
Sbjct: 1  MQIHLSGHHIEITESLRAYVEEKFS-KLERHFEQINNVHVVLNVEKMQQIAEARINL-TG 58

Query: 61 VVLHAAGQANDPQASFDAAAERIEKRLRRYKRKLKDH 97
            + A  +  D  A+ D   +++++++ ++K KL  H
Sbjct: 59 GEVFATSEHADMYAAIDVLIDKLDRQVIKHKEKLTKH 95