Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 270 a.a., formamidopyrimidine-DNA glycosylase (fpg) from Pseudomonas stutzeri RCH2

 Score =  192 bits (488), Expect = 7e-54
 Identities = 116/298 (38%), Positives = 165/298 (55%), Gaps = 28/298 (9%)

Query: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60
           MPELPEVET RRG+ P + G RV ++ +    LR+P P D    + G+ I ++ RRAKYL
Sbjct: 1   MPELPEVETTRRGIEPHLLGQRVDRVLVRDRRLRWPVPEDLDVRLSGQRIDAVERRAKYL 60

Query: 61  LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV 120
           LI+ E G T++ HLGMSGS R+                A    GKHDHV   L+ G+   
Sbjct: 61  LIKAETG-TLIVHLGMSGSLRLVD--------------AAQPVGKHDHVDILLESGQ--- 102

Query: 121 CVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKSTLL 180
            + Y DPRRFG M   E      +   A LGPEP G     D L     G+S  +K  ++
Sbjct: 103 ALRYTDPRRFGAMLWSEEPL--AHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIM 160

Query: 181 DQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIAAG 240
           D  ++ G+GNIY  EAL+ A + P R AG++       +A+ + L E++R ++A AI  G
Sbjct: 161 DNAVVVGVGNIYASEALFAAGIDPRRPAGSI------SRARYLKLGEEVRRILAMAIERG 214

Query: 241 GSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298
           G++LRD +  DG  GYFQ    VY + G+ C++  CG T+  +    R++ YC+ CQ+
Sbjct: 215 GTTLRDFVGGDGKPGYFQQELFVYGRAGEFCKS--CGSTLREIRLGQRASVYCSRCQR 270