Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 271 a.a., Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) from Xanthomonas campestris pv. campestris strain 8004

 Score =  211 bits (538), Expect = 1e-59
 Identities = 125/298 (41%), Positives = 170/298 (57%), Gaps = 27/298 (9%)

Query: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60
           MPELPEVET  RGLAP + G R+  + L RPDLR+P  A    L+ G TI  + RRAKYL
Sbjct: 1   MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAAQIEQLLPGATITDVRRRAKYL 60

Query: 61  LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV 120
           LI+ + G + V HLGMSGS R+      G   P A          HDHV   L  G    
Sbjct: 61  LIDTDAGGSAVLHLGMSGSLRVL----PGDTPPRA----------HDHVDISLQNGR--- 103

Query: 121 CVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKSTLL 180
            + +NDPRRFG   L+ +   + +   A LGPEP   A + DYL +   G+   +K+ L+
Sbjct: 104 VLRFNDPRRFGC--LLWQRDCETHELLASLGPEPLSAAFTGDYLHALACGRRAAVKTFLM 161

Query: 181 DQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIAAG 240
           DQ ++ G+GNIY  E+L RA +SPLR AG +   R +       L + +++++A AI  G
Sbjct: 162 DQAVVVGVGNIYAAESLHRAGISPLREAGKVSRERYR------RLADAVKEILAYAIQRG 215

Query: 241 GSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298
           G++LRD I  DG  GYF+    VY +EG+ CR   CGG ++      R+T +CAACQ+
Sbjct: 216 GTTLRDFISPDGAPGYFEQELMVYGREGEACR--HCGGELKHATIGQRATVWCAACQR 271