Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 282 a.a., DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase from Synechococcus elongatus PCC 7942

 Score =  122 bits (307), Expect = 7e-33
 Identities = 100/308 (32%), Positives = 140/308 (45%), Gaps = 40/308 (12%)

Query: 1   MPELPEVETVRRGLAP-----AMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGR 55
           +PELPEVETVRRGL          G  V    L    +  P P  F   ++   I    R
Sbjct: 1   LPELPEVETVRRGLTQQTLQRVCTGGEV----LLSRTIATPTPELFLVALQQTQIQEWRR 56

Query: 56  RAKYLLIEL----EDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVF 111
           R KYLL +L    E   T   HL M+G F               +    +   KH  V  
Sbjct: 57  RGKYLLADLSREGEPAGTWGVHLRMTGQF--------------FWTEPATPLTKHTRVRL 102

Query: 112 HLDKGEERVCVIYNDPRRFGFMHLV--ERNKLDLYPAFAELGPEPTGNALSADYLASRFE 169
             +   E   + + D R FG M  V  +R    +    ++LGPEP     +A YL  R  
Sbjct: 103 RFEGDRE---LRFIDIRSFGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLR 159

Query: 170 GKSQPLKSTLLDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKI 229
              +P+K+ LLDQ ++AG+GNIY  E+L+R  + P   +  L       K Q   L E I
Sbjct: 160 RSQRPIKTALLDQSLVAGIGNIYADESLFRTGIHPTTPSDRLT------KIQAEKLREAI 213

Query: 230 RDVIADAIAAGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRS 289
            +V+  +I AGG++  D     G  G +     VY ++ QPCRT  CG  ++++  AGRS
Sbjct: 214 VEVLTASIGAGGTTFSDFRDLTGVNGNYGGQAWVYGRKDQPCRT--CGTPIQKLKLAGRS 271

Query: 290 TFYCAACQ 297
           + +C  CQ
Sbjct: 272 SHFCPRCQ 279