Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 271 a.a., formamidopyrimidine-DNA glycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  184 bits (466), Expect = 3e-51
 Identities = 114/297 (38%), Positives = 161/297 (54%), Gaps = 28/297 (9%)

Query: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60
           MPELPEVE  R+G+AP +EG RV  L +   +LR+P P + A  I G+TI+ + RRAKYL
Sbjct: 1   MPELPEVEVTRQGIAPHLEGNRVEALIVRNANLRWPVP-ELAQNIVGQTILGVRRRAKYL 59

Query: 61  LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV 120
           LI+ + G TIV HLGMSGS R+  +               +   KHDH+   +  G    
Sbjct: 60  LIDTQAGTTIV-HLGMSGSLRVLPKN--------------TPVEKHDHIDLVMQNGR--- 101

Query: 121 CVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKSTLL 180
            + +NDPRRFG     E  +   +P   +LGPEP   A  ADYL +  +GK + +K  L+
Sbjct: 102 VLRFNDPRRFGAWLWSELPEA-AHPLLEKLGPEPLSAAFHADYLQAALKGKKKAIKLCLM 160

Query: 181 DQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIAAG 240
           D  I+ G+GNIY  EAL+ A + P   AG +   R      L  LT +++ ++  AI  G
Sbjct: 161 DNAIVVGVGNIYANEALFAAGIHPEAEAGKVDAER------LTLLTAEVKTILTQAIKQG 214

Query: 241 GSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQ 297
           G++L+D    DG  GYF     VY + G+ C    CG  +  +    R+T +C+ CQ
Sbjct: 215 GTTLKDFTNADGKPGYFAQKLHVYGRGGETCTE--CGHLLSEIRLGQRTTVFCSLCQ 269