Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 274 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Dyella japonica UNC79MFTsu3.2

 Score =  195 bits (495), Expect = 1e-54
 Identities = 118/299 (39%), Positives = 167/299 (55%), Gaps = 26/299 (8%)

Query: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60
           MPELPEVET RRG+AP + G R+  + L RPDLR+P P +   L+ G+ I  + RRAKYL
Sbjct: 1   MPELPEVETTRRGIAPHLIGRRITSVVLRRPDLRWPIPPEVGALLPGQRIEEVERRAKYL 60

Query: 61  LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV 120
           L+  + G  ++ HLGM+G  R+        +AP          GKHDHV   L+      
Sbjct: 61  LLHTQVGSALL-HLGMTGVLRVLPP-----DAP---------VGKHDHVDIALEATTVGA 105

Query: 121 CVI-YNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKSTL 179
            ++ + D RRFG   L+ +     +     LGPEP  +A   D L     G++  +K  L
Sbjct: 106 RILRFTDARRFGC--LLWQPPGTTHELLENLGPEPLTDAFDGDLLWHLSRGRTAAVKLFL 163

Query: 180 LDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIAA 239
           +D  ++ G+GNIY  EAL+ A + P RAAG++       +A+   L  +++ ++A AI  
Sbjct: 164 MDNAVVVGVGNIYASEALFAAGIDPRRAAGSV------SRARYARLAAEVKRILAWAIER 217

Query: 240 GGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298
           GG++LRD I  DG  GYF     VY +EG+PCRT  CG  + +VV   RSTF+C  CQK
Sbjct: 218 GGTTLRDFINPDGMPGYFVRELQVYGREGEPCRT--CGTAIRQVVLGQRSTFWCPRCQK 274