Pairwise Alignments

Query, 527 a.a., peptide chain release factor 3 from Agrobacterium fabrum C58

Subject, 697 a.a., translation elongation factor G (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  163 bits (412), Expect = 2e-44
 Identities = 129/474 (27%), Positives = 228/474 (48%), Gaps = 40/474 (8%)

Query: 9   VSRRRTFAIIAHPDAGKTTLTEKLLLFGGAIQLAGEVKAKKDRIQTRSDWMKIERERGIS 68
           +S+ R   I AH DAGKTT TE++L   G I   GEV       ++ +D+M  E ERGI+
Sbjct: 4   LSKYRNIGIFAHVDAGKTTTTERILKLTGKIHKIGEVHDG----ESTTDFMVQEAERGIT 59

Query: 69  VVTSVMTFEYNDRVFNILDTPGHEDFADDTYRTLTAVDAAIMVIDAAKGIEPRTLKLFEV 128
           + ++ ++  + D  FN++DTPGH DF  + YR+L  +D  I V   + G+EP++   +  
Sbjct: 60  IQSAAVSCFWKDHRFNVIDTPGHVDFTVEVYRSLKVLDGGIAVFCGSGGVEPQSETNWRY 119

Query: 129 CRMRDIPIITFINKMDRESRDPFEILDEVEEKLALDTAPITWPVGRAKSFCGAYN-LAEN 187
               ++  I F+NK+DR   D   ++ + ++ LA +   +  P+G    FCG  + L   
Sbjct: 120 ANESEVARIIFVNKLDRMGADFLRVVKQTKDVLAANPLVMVLPIGIEDEFCGVVDLLTRK 179

Query: 188 TFRGNDTQV-DGLSVNGPQAVADRLPENERKVFVEET---------------ELALEACR 231
            +  +D+ + +   V    A    L E  R++ +E                 E ++E  +
Sbjct: 180 AYVWDDSGIPENFEVKDVPANMVDLVEEYREMLIETAVEQDDDLLEAYMEGEEPSIEDLK 239

Query: 232 PFDRQAFLEGHMTPVFFGSALRNFGVRDLINALGDFAPPPRDQV------------ADTR 279
              R+        P F GSA +N G++ +++A+ D+ P P D+V                
Sbjct: 240 RCIRKGTRTMAFFPTFCGSAFKNKGMQLVLDAVVDYLPAP-DEVDPQPLTDEEGNETGEY 298

Query: 280 VVHAAEDKMTAFVFKIQANMDPNHRDRIAFARICSGKLERGMKARLSRTGKLMGLTAPQF 339
            + +A++ + A  FKI   MD +    + F RI +G+L++G     S TGK   +     
Sbjct: 299 AIVSADESLKALAFKI---MD-DRFGALTFVRIYAGRLKKGDTILNSATGKTERIGRMCE 354

Query: 340 FFASQRQLADTAFAGDVVGIPNHGTLRIGDTLTEGEN-LVFQGVPNFSPEILRRVRLEDA 398
            +A+ R   ++A AGD++ I     ++ G TL + ++    + +    P I   V  +D 
Sbjct: 355 MYANDRIEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVFPEPVISIAVAPKDK 414

Query: 399 MKAKKLKEALQQM-AEEGVVQLFSPEDGSPAIVGVVGALQLDVLKERLMGEYGL 451
             ++K+  A+ +M AE+   ++ + ED    I+  +G L LD+  + L   YG+
Sbjct: 415 GGSEKMAIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKRTYGV 468