Pairwise Alignments

Query, 205 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 222 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

 Score = 68.2 bits (165), Expect = 1e-16
 Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 28/211 (13%)

Query: 3   LTTLLAYATALFIAAAIPGPGMTAIVARALGSGFRETFFMGLGLVLGDMIYLTGVILGLA 62
           ++ L   A   FIA   PGP +  +V  A   G +    + LGL  G +++L   + G++
Sbjct: 4   MSILATLAGVHFIALLSPGPDVALVVQNATQHGRKTGVMIALGLSCGILVHLILSLSGIS 63

Query: 63  FVAQTFQEAFMVLKFAGAAYLLYIAWKLWTAGLLPQDLKARKSTSIP------------- 109
           ++ +     F +L+ AG +YLLY+      AG L Q + A+K+ S P             
Sbjct: 64  YLVKQQPMLFNLLQLAGGSYLLYLG-----AGAL-QSVMAQKNASTPTHSPAPSILGNRR 117

Query: 110 MSFLSGLLITLGNPKTMLFYVALVPTLIDIRM-----IGPSEYATLLALTFVVLMAVLLP 164
            +F  G++  L NPK ++F+V+L+ +LI   M     +  +     L+LT+   +A LL 
Sbjct: 118 QAFTKGMMTNLLNPKALVFFVSLLSSLIPASMSVSGKVSAAAILVGLSLTWFSCLAWLLT 177

Query: 165 YILLAAKARNLLKRPSALTILNRTAAGILAG 195
              +  + + + +   ++      A  ILAG
Sbjct: 178 TSAMQQRMQRITRSVDSIC----AAVFILAG 204