Pairwise Alignments

Query, 205 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.6 bits (179), Expect = 2e-18
 Identities = 50/201 (24%), Positives = 88/201 (43%)

Query: 1   MTLTTLLAYATALFIAAAIPGPGMTAIVARALGSGFRETFFMGLGLVLGDMIYLTGVILG 60
           M +   LAY     + +  PG G    ++  L  G R +    +GL +G   ++  V +G
Sbjct: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60

Query: 61  LAFVAQTFQEAFMVLKFAGAAYLLYIAWKLWTAGLLPQDLKARKSTSIPMSFLSGLLITL 120
           +  +      AF ++K+ GAAYL+++  + W               S        +LI L
Sbjct: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHELSQAALLRKAVLINL 120

Query: 121 GNPKTMLFYVALVPTLIDIRMIGPSEYATLLALTFVVLMAVLLPYILLAAKARNLLKRPS 180
            NPK+++F VAL P  ID       ++  L   T  +   V+  Y  LAA+    ++ P+
Sbjct: 121 TNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRSPN 180

Query: 181 ALTILNRTAAGILAGTATMIA 201
            +T +N+    +  G   ++A
Sbjct: 181 IMTRMNKLFGSMFMGCGMLLA 201