Pairwise Alignments

Query, 510 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

 Score =  380 bits (976), Expect = e-110
 Identities = 220/501 (43%), Positives = 305/501 (60%), Gaps = 12/501 (2%)

Query: 2   VARVNTVAFQGIEGVPVEVQVMVAPGKIGIQIVGLPDKAVAESRERVQAALHASGLALPA 61
           +A +++ A  G++  PV V+V ++ G  G  +VGLP+  V ESR+RV++A+  S    PA
Sbjct: 3   LAIIHSRASIGVQAPPVTVEVHISNGMPGFTLVGLPETTVKESRDRVRSAIINSRFEFPA 62

Query: 62  KKVTVNLAPADLPKEGSHFDLPIALGLMAALGAIPAEALSQYVVLGELNLDGTIGTVSGA 121
           K++TVNLAPADLPKEG  FDLPIALG++AA   I    L  Y  +GEL L G I  V G 
Sbjct: 63  KRITVNLAPADLPKEGGRFDLPIALGILAASDQIARNKLESYEFIGELALSGEIRGVKGV 122

Query: 122 LPAAIGANALGKGLICPAESGPEAAWAGAGIDILAPRSLIALANHFRGTQLLS--RPTPA 179
           LPAA+ AN + + L+ P  +G +AA  G      A +SL+ +     G Q LS  + +P+
Sbjct: 123 LPAALAANQVERCLVVPHSNGDQAALVGVERHKSA-QSLLEVCADLCGQQTLSLFQSSPS 181

Query: 180 IRANPVNLPDLADIKGQESARRAMEVAAAGGHNLLMVGPPGSGKSMLAARLPSILPPLEV 239
           ++       DL DI GQ+  +RA+E+AAAG HNLL +GPPG+GK+MLA+RL  +LP +  
Sbjct: 182 VQ-QVSQTRDLQDIIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCDLLPEMSD 240

Query: 240 AELLEVSMVHSIAGQLSGGKLSDRRPFRTPHHSATMAALIGGGLRARPGEASLAHHGVLF 299
            E +E + + S+  Q         RPFR PHHS++MAAL+GGG   RPGE SLAH+G+LF
Sbjct: 241 EEAMETASIASLTQQEINQHNWKLRPFRAPHHSSSMAALVGGGTIPRPGEISLAHNGLLF 300

Query: 300 LDEFPEFSPQVLDALRQPLETGECIIARANHRVSYPAEIQLVAAMNPCRCGMAGEPGFTC 359
           LDE PEF  +VLD+LR+PLE+GE +I+RA  +  +PA  QLV A+NP   G     G   
Sbjct: 301 LDEMPEFERKVLDSLREPLESGEIVISRAQGKTRFPARFQLVGALNPSPTGY--YEGSQA 358

Query: 360 ARGPRCVTDYQSRISGPLLDRIDIRIDVPAVSATDLIRPVVSEPSAVVAARVARARLAQQ 419
              P+ +  Y SR+SGPLLDR D+ I++PA+    L      +     AA   R  +A++
Sbjct: 359 RANPQSILRYLSRLSGPLLDRFDMSIEIPALPKGTLANG--GDRGESTAAVRQRVWVARE 416

Query: 420 ERYAAAGFPAIRTNARCTTTLIEKYAEPDASGLQLLRDAAERLKFSARGYHRILKVARTL 479
              A +G    + NA   +  IE+Y     +  + L  A  RL  S R YHRI+KVART+
Sbjct: 417 RMLARSG----KVNALLQSREIEQYCPLLKADAEFLESALHRLGLSIRAYHRIIKVARTI 472

Query: 480 ADLDGKQTVGRIHVAEAVSYR 500
           ADL G+  + R H+AEA+ YR
Sbjct: 473 ADLQGEAQIARPHLAEALGYR 493