Pairwise Alignments

Query, 326 a.a., NADH-ubiquinone oxidoreductase from Agrobacterium fabrum C58

Subject, 530 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 60/279 (21%), Positives = 115/279 (41%), Gaps = 6/279 (2%)

Query: 10  VTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQANLRYRDSI 69
           V V G +G+VG  +V  L   G+R+R  VR P      +P     ++   + +L    S+
Sbjct: 11  VCVTGATGYVGGRLVPRLLDHGWRVRALVRTPAKL-LCRPWARHPRLDIIRGDLDDACSL 69

Query: 70  IKAVEDADHVVNCVGILAE--SGRNTFDAVQEFGAKAIAEAARDT-GATLTHISAIGADA 126
           + A+E  D V   V  +    +GR+TF       A  +  A  +     + ++S +  + 
Sbjct: 70  VPALEGCDAVFYLVHSMNPHVTGRDTFAKADRAAASNMVRACDEARPGRIIYLSGLVPEG 129

Query: 127 NSQTGYGRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMARNLPFLPLIGGGK 186
              + + R++      +        +LR + I G     F     +   LP +       
Sbjct: 130 EELSPHLRSRAEVADILARGETPLTVLRAAQILGSGSASFEMVRYLVDRLPVMLTPRWVH 189

Query: 187 TKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLEAVL-AATYRERSFVNL 245
           +  QP+ + +V   +   +D     G  Y++GGPD++++R+  +     A  R R+ + +
Sbjct: 190 SLCQPIAISNVLGYLEGCLDHPETMGQTYDIGGPDILSYRELFDIFAEVAQLRRRTIIPV 249

Query: 246 PFGVASMIGKLASLVPLITPPLTPDQVTMLKKDNVVSAE 284
           P     +     +LV  I   L    +  L ++ VV A+
Sbjct: 250 PVLSPELSAHWINLVTPIPKALATPLIQGL-RNRVVCAD 287