Pairwise Alignments

Query, 326 a.a., NADH-ubiquinone oxidoreductase from Agrobacterium fabrum C58

Subject, 880 a.a., NAD-dependent epimerase/dehydratase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 66/249 (26%), Positives = 100/249 (40%), Gaps = 38/249 (15%)

Query: 10  VTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQANLRYRDSI 69
           + + G +GF+G +++  L  +GY IR  V    L G    L +  QI   +  L   D++
Sbjct: 529 IAITGCTGFIGTNLIPKLLAKGYTIRALV----LPGTGDVLPDSPQIELIEGGLGDTDAL 584

Query: 70  IKAVEDADHVVNCVGILA-------------ESGRNTFDAVQEFGAKAIAEAARDTGA-- 114
            + VE A  V++    LA             E   N   AV   GA A         A  
Sbjct: 585 ARLVEGARVVLHMAARLAGSCTLVELRETNVEGTHNLIRAVNAAGACARFVFCSSVAAYQ 644

Query: 115 --------TLTHISAIGAD-ANSQTGYGRTK--GRAEAAIHSVLPG--AVILRPSIIFGP 161
                    +   SA+  D  +  + YG TK  G   A  +    G    ILR ++++G 
Sbjct: 645 NQFAEAEWPIHESSALRVDGGHDLSDYGMTKIAGENLARFYGRKFGYEHAILRFALVYGV 704

Query: 162 EDDFFNKFAKMARNLPFLPLIGGGKTKFQPVYVEDVAEAVARSVDGKLKPGA---IYELG 218
            D   +   K     P       G+   Q V+V D  EA+ R+     +PGA    + + 
Sbjct: 705 GDPLVDPMVKTEAPKPEFGKGQQGEQPRQFVHVTDAVEAILRAC---FEPGARNETFTVA 761

Query: 219 GPDVMTFRD 227
           GPDV+T+RD
Sbjct: 762 GPDVITYRD 770