Pairwise Alignments

Query, 367 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Pseudomonas fluorescens FW300-N2E2

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 10/226 (4%)

Query: 15  AGVTATALAAPAIAQENPKITWR-MTSSFTKGLDILFGAG-QIVADHVKEASGGNFVIQH 72
           AG  AT L   ++     +I  R +  +F    +   G G Q  AD + E SGG   ++ 
Sbjct: 10  AGACATGLLLGSVVSHADEIRERTLRFAFQNVKEHPQGQGAQKFADLLSEKSGGKIKVRL 69

Query: 73  FAGGEIVPALQAADAVTAGTVEMAHTCSYYYVGKDPTFALGTSVPFGL-NARQTNAWFNQ 131
           F GG +   +Q   A+  GT+++    S     + P +A+    PF   N  + +A  + 
Sbjct: 70  FPGGTLGGDVQTVSALQGGTLDITVLNSGILAAQAPDYAM-LDFPFLFNNVEEAHAVIDG 128

Query: 132 AGGNELLNEFLAQHNIYSILLGNTGAQMGGWFRKEINTIDDLKGLKMRI--AGLTGQVMQ 189
             G +L  + L    + ++   + G +     +  +  ++D++GLK+R+  + +  +   
Sbjct: 129 PVGQKLAVQ-LDSKGLVALGYWDLGFRNLTNSKHPVTKLEDMQGLKIRVIQSPIYLETFS 187

Query: 190 KVGVTPQQIAGGDVYAALEKGTIDATEFVGPYD-DQKLGFYKVAKY 234
            +G  P  +A  +VY  LE+ TID  E   P+   +   FY+V KY
Sbjct: 188 ALGANPVPMAFPEVYTGLEQHTIDGQE--NPFTVIEGNKFYEVQKY 231