Pairwise Alignments

Query, 367 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  204 bits (520), Expect = 2e-57
 Identities = 124/354 (35%), Positives = 193/354 (54%), Gaps = 8/354 (2%)

Query: 5   SFIRKAGAVGAGVTATALAAPAIAQENPKITWRMTSSFTKGLD--ILFGAGQIVADHVKE 62
           +++ K+  + A V +T L     AQ N    +++T + T G +  IL  A + +A    E
Sbjct: 5   TYLNKSRIMLALVLSTVLGT---AQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAE 61

Query: 63  ASGGNFVIQHFAGGEIVPALQAADAVTAGTVEMAHTCSYYYVGKDPTFALGTSVPFGLNA 122
            S G   I+  +  +    L   D V +G  ++ H+ SYY+ GK P     +S+PFG+ A
Sbjct: 62  MSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIA 121

Query: 123 RQTNAWFNQAGGNELLNEFLAQHNIYSILLGNTGAQMGGWFRKEINTIDDLKGLKMRIAG 182
            +  AWF   GG  L+ +  A HN+ S   GN+  QMGGWF+KEIN++DDL+GLKMRI G
Sbjct: 122 TEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPG 181

Query: 183 LTGQVMQKVGVTPQQIAGGDVYAALEKGTIDATEFVGPYDDQKLGFYKVAKYYYYPAWWE 242
             G+V+ K+G  P  IA G++Y +LE+GTIDA E+VGP  D ++GF+K+A  YYY AW E
Sbjct: 182 FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHE 240

Query: 243 GGPAVHAFVNLQKFNDLPENYKRILKDACAAGSASMLERYDARNPKALKELVAQ--GAIL 300
            G      VN +K++ LP++ + IL+ A    +  M  +    N  +   + ++     +
Sbjct: 241 PGSETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKV 300

Query: 301 RPFSQEILDVCHKAAQDTYAEISAKNESFKKIYESQQAFKKDAYLWAQIAEYTY 354
           R F   +L    +A  +   E +A +   K+I +SQQA+      W +I+   Y
Sbjct: 301 RDFPPAVLAALRQANNELLQEQAASDPLAKEIIDSQQAYLTKVRDWTRISTQAY 354