Pairwise Alignments

Query, 298 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 65/248 (26%), Positives = 121/248 (48%), Gaps = 8/248 (3%)

Query: 49  IERIDARFHGNAYAPHRHDTYALGVTLSGVQTFSYRGTSHFSMPGNVIVLHPDEIHDGGA 108
           I  I+A +   A+  H H    +G+   GVQ F ++G  H    G V+++ PDE+HDG A
Sbjct: 17  ISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHA 76

Query: 109 GTDEGLHYRMLYLPPE---KTTEAGY--NTLPFARSAVIEDEEFRQCLTEALGNLDGEPD 163
            ++ G   ++  + PE   +T EA      + F +  +++D      L +    L  +  
Sbjct: 77  HSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQ-LIVQDPTLFHSLQQLHHLLRQDNL 135

Query: 164 SLLLTDW--QSRLSDLLWKHSNGSARSIKWIDRAAVLLCRDYLLENSADTVVSQELEQIS 221
           S L  D       + LL ++S     ++K + +  + L ++++L      +  ++L Q+ 
Sbjct: 136 SQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQLAQLC 195

Query: 222 GLDRFTLFRHFRCVFGTSPHRYLIMRRLQKCKDMMRAGASLAETAFACGFADQAHFTRHF 281
            L      RHF+   G +P+ +L   RL++   ++++G    + A+  GF DQAHF++ F
Sbjct: 196 QLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSKAF 255

Query: 282 KNAFGMPP 289
           K  +G+ P
Sbjct: 256 KATYGLSP 263