Pairwise Alignments

Query, 527 a.a., component of type IV pilus from Agrobacterium fabrum C58

Subject, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

 Score = 75.5 bits (184), Expect = 5e-18
 Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 30/286 (10%)

Query: 210 ERRQVSQIVNMLTIEGEDQVTLKVTVAEVSRQVLKQLGFN----------------GSIS 253
           E RQV++ + +       QV L+  + EV+     Q G N                GSI+
Sbjct: 259 EIRQVNEFLGISQQRMHRQVILEAKILEVTLSDGYQQGINWSKAFSSNGANYKIGSGSIT 318

Query: 254 SSTSGNGFEFANPS--NLGNAIDGASRIASGAIGSGSLRFASYLNAMEQAGVMRTLAEPS 311
             ++GN      P    +GN + G S +    I SGS  F + ++ M   G +  L+ P 
Sbjct: 319 QDSNGNPITSVLPGLDAIGNLLGGQSNVV---ISSGS--FDAVISFMATQGDLNVLSSPR 373

Query: 312 LTAISGEQAKFYVGGDFRLAAEQEVDI---DKETGRPTITRTTNTVDYGITLNFKPVVLS 368
           +TA + ++A   VG D     +    +   D     P IT T      GI+L+  P +  
Sbjct: 374 VTASNNQKAVIKVGTDEYYVTDLSSVVGTGDNAQASPDITLTP--FFSGISLDVTPQIDD 431

Query: 369 PGRISLKIETNVSEPTYEGNVVTGNGGRTIPGSTYMSVRKRETSTTVELPSGGSIVIAGL 428
            G + L +   V E   +   +              S+R  E+ + +    G  +VI GL
Sbjct: 432 QGNVLLHVHPAVIEVEQQTKKILYRSEEIELPLARSSIR--ESDSVIRAKDGDVVVIGGL 489

Query: 429 VQDNVRQAMSGLPGMSKIPIFGTLFRSKEFLRNETELVIIATPYLV 474
           ++ N    +S +P +  +P  G LFR+   L  +TELVI+  P +V
Sbjct: 490 MKSNTVDQVSKVPFLGDVPALGHLFRNTTKLTQKTELVILLKPTVV 535