Pairwise Alignments

Query, 527 a.a., component of type IV pilus from Agrobacterium fabrum C58

Subject, 413 a.a., DNA transporter HofQ from Klebsiella michiganensis M5al

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 23/250 (9%)

Query: 228 QVTLKVTVAEVSRQVLKQLGFNGSISSSTS--GNGFEFANPSNLGNAIDGASRIASGAIG 285
           QV L   +  +S   L++LG   S++ ++S  G+G      SNL  A+  AS  A   IG
Sbjct: 181 QVELAAHIVSMSETSLRELGVKWSLADASSPPGSGKLTTLSSNL--AVGDASTRAGFNIG 238

Query: 286 S-GSLRFASYLNAMEQAGVMRTLAEPSLTAISGEQAKFYVGGDFRLAAEQEVDIDKETGR 344
             G       L+A+EQ   +  +A P L A   + A    G +             E+G 
Sbjct: 239 RIGGRLLELELSALEQKQKVDIIASPRLLASHMQPASIKQGSEIPYQVSSG-----ESGA 293

Query: 345 PTITRTTNTVDYGITLNFKPVVLSPGRISLKIETNVSEPTYEGNVVTGNGGRTIPGSTYM 404
            ++      +   +T    P VL   R+ LK+  + + P   G V+    G  +      
Sbjct: 294 TSVEFKEAVLGMEVT----PTVLHHDRVRLKLRISENTP---GQVLKQENGEVL------ 340

Query: 405 SVRKRETSTTVELPSGGSIVIAGLVQDNVRQAMSGLPGMSKIPIFGTLFRSKEFLRNETE 464
           ++ K+E  T VE+ SG ++ + G+     + +  G+P +  IP  G LFR         E
Sbjct: 341 AIDKQEIETQVEVKSGETLALGGIFAQKNKTSRDGIPLLGDIPWLGQLFRRDGKDNERRE 400

Query: 465 LVIIATPYLV 474
           LV+  TP ++
Sbjct: 401 LVVFITPRIL 410