Pairwise Alignments

Query, 491 a.a., component of type IV pilus from Agrobacterium fabrum C58

Subject, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 34/315 (10%)

Query: 86  LSQLAKLDAESAREEIRDIVNDIITIKNFAMSIAEQEELLEDICNDVLGYGPLEPLLARD 145
           L+Q+ + D+  AR+ + DI  D     + A  + + E+LLE   +      P+  L+   
Sbjct: 76  LTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDD-----APIIKLI-NA 129

Query: 146 DIADIMVNGSGQTFIEVGGKTIESDIRFRDNA---QLLSICQRIVSQVGRRVDESS--PI 200
            + + +  G+    IE   KT+   IRFR +    ++L+  +++ S +  RV   +   I
Sbjct: 130 MLGEAIKEGASDIHIETFEKTL--SIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDI 187

Query: 201 CDARLPDGSRVNVIAPPLAID----------GPALTIRKFKRDKLTLDQLVRFGAITPEG 250
            + R+P   R+++     A+D          G  + +R   ++   LD L   G      
Sbjct: 188 AEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLD-LHSLGMTAHNH 246

Query: 251 ATLLKIIGRVRCNVVISGGTGSGKTTLLNCLTSFIDKDER-VITCEDTAELQLQQPHVVR 309
               ++I R    ++++G TGSGK+T L      ++  ER ++T ED  E  +      +
Sbjct: 247 DNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQ 306

Query: 310 LETRPPNIEGEGEITMRDLVKNCLRMRPERIVVGEVRGPEVFDL-LQAMNTGHDGSMGTL 368
           +  R        ++T    ++  LR  P+ ++VGE+R  E   + +QA  TGH   M TL
Sbjct: 307 VNPRV-------DMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGH-LVMSTL 358

Query: 369 HANTPRECLSRIESM 383
           H NT    ++R+  M
Sbjct: 359 HTNTAVGAVTRLRDM 373