Pairwise Alignments

Query, 491 a.a., component of type IV pilus from Agrobacterium fabrum C58

Subject, 549 a.a., Flp pilus assembly complex ATPase component TadA from Methanococcus maripaludis S2

 Score =  202 bits (513), Expect = 3e-56
 Identities = 128/319 (40%), Positives = 176/319 (55%), Gaps = 22/319 (6%)

Query: 136 GPLEPLLARDDIADIMVNG--SGQTFIEVGGKTIESDIRFRDNAQLLSICQRIVSQVGRR 193
           G LE  L    + ++MVNG  S         +  E++IR  D  +   + + I    GR 
Sbjct: 168 GLLEIPLNDSKLEEVMVNGVESPSFVFHRKYQMCETNIRL-DRHEATRVVESIAYLAGRT 226

Query: 194 VDESSPICDARLPDGSRVNVIAPPLAIDGPALTIRKFKRDKLTLDQLVRFGAITPEGATL 253
           +D  +P+ DA LPDGSRVN     + + G  +TIRKF  D LT+  L+ FG    E A  
Sbjct: 227 IDSRTPMLDAFLPDGSRVNATMSDVTLGGNTITIRKFSEDPLTIVDLINFGTFDLELAAF 286

Query: 254 L-----KIIGRVRCNVVISGGTGSGKTTLLNCLTSFIDKDERVITCEDTAELQLQQPHVV 308
           L        G    N +I GGTGSGKTT LN ++ F    +R++T EDT ELQ+   H++
Sbjct: 287 LWQAVEGYFGAKPANTLIVGGTGSGKTTTLNVVSMFSMYTDRLVTIEDTPELQVPLTHLI 346

Query: 309 RLETRP--PNIEGEGEITMRDLVKNCLRMRPERIVVGEVRGPEVFDLLQAMNTGHDGSMG 366
           ++ TRP  P I+G  EITM DL+KN LRMRP+RI VGEVRG E   LL AMNTGHDG  G
Sbjct: 347 KMITRPGRPGIQGY-EITMDDLIKNSLRMRPDRIFVGEVRGSEAHSLLVAMNTGHDGCSG 405

Query: 367 TLHANTPRECLSRIESMIAMGGFTLPAKTVREIISGSIDVVIQAARLRDGSRRITQITEV 426
           TLHAN+  E L R+ +         P   V +++  S+D +I   R++   + + +I  V
Sbjct: 406 TLHANSADEALIRLIN---------PPMNVPKVMMSSVDFIINQQRIKRNKKTVRRILGV 456

Query: 427 --IGMEGDVIVTQDLMRYE 443
             IG  G+ I   +L +Y+
Sbjct: 457 VEIGGSGENITKTELFKYD 475