Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 301 a.a., HTH-type transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score =  146 bits (369), Expect = 5e-40
 Identities = 91/293 (31%), Positives = 150/293 (51%), Gaps = 3/293 (1%)

Query: 1   MNWDDVRIFLAVARSGQILAASKRLGLNHATLSRRLTLLEQALKTQLFIRRTNGCEMTEE 60
           M+WD +RIF AVA +G +  A  +L L+ + +SR++  LE++L + LF R   G  +TE+
Sbjct: 1   MDWDKLRIFHAVADAGSLTHAGDKLNLSQSAVSRQIRALEESLSSTLFHRHARGLILTEQ 60

Query: 61  GQRFLGAAERMETEMLNAQANLGRVDTAVAGTVRIGAPDGLGVSFLAPRLGRLTARYPDL 120
           G+    A + M   +  A A +   +  V G +R+    G G  +LAPRL +L  +YPDL
Sbjct: 61  GELLFDATKSMSKRLEAASARIRDSEEEVFGELRVTTTFGFGTLWLAPRLTKLYEQYPDL 120

Query: 121 KIQLVPVPRSFSLSQREADIAITIERPEQGRLMFSKLTDYSLGLYASADYLADHGTPDDV 180
           KI L+   R   L  READ+AI ++ P Q  L+  +L    + LYAS  Y+  +GTP+  
Sbjct: 121 KIDLMLEERVLDLPMREADVAIRMKEPSQADLIRKRLMTVQMKLYASRAYVERNGTPEQA 180

Query: 181 EALKRHRRI--GYVEDLIFSPSLNYTGEIMRDWDAAFEISSATGQTEAVRSGAGIGILHN 238
           E +  HR I        + S ++     +  +  +   +++  G  + V    GIG+L +
Sbjct: 181 EDIVDHRLICQNPRSAQVGSAAVLVQKLMTHNPSSLLTVNNYFGVLQGVIHDLGIGVLPD 240

Query: 239 YIAGQYPELMRIMPHLGISR-SYWTAYHESARQLVRVRTVVDFLQELVAEERR 290
           Y+   +P+L+ ++     S    + AY E  R   R+    DF+Q  +   R+
Sbjct: 241 YVTEDFPDLVPVLQEEDTSDVPVYLAYPEELRHSRRISAFRDFVQNEIIAHRK 293