Pairwise Alignments

Query, 348 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 346 a.a., AbrB family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 97.1 bits (240), Expect = 6e-25
 Identities = 88/344 (25%), Positives = 166/344 (48%), Gaps = 9/344 (2%)

Query: 7   FHTFALTALVGSMGALLASLLHIP-APFLSGPALAVTITGLAGVKLGIPAFIRNACFVVV 65
           F  F    ++ ++ A   +LL IP +       L + +     + +  P ++     VV+
Sbjct: 7   FTLFIQILIIAAVAAGTGTLLSIPLSEMFIASGLVIVLHKKRWLTIHTPPWLLLFVQVVL 66

Query: 66  GISMGTSVTPSVIDAAKTWPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGH 125
           GIS+G +++ S +    T P+  + ++  + + +  +Y  L    G+    ++LGA PG 
Sbjct: 67  GISVGATISLSELGTTLTLPV-IVGLVCCLTLQIISSYLWLTKKEGWTPFESLLGAVPGA 125

Query: 126 LSYIISLGAETKSDLATVSIVQSVRVLALTLSVPLIVEYF-DLVSTEPLITNPPMGFFTL 184
           ++ I+ +   ++   A V    SVR++ LTL   LI     D  S +  +T      F L
Sbjct: 126 MAAILVISESSEKPSAKVVYSHSVRLMILTLLALLISNSAPDSASVDGSLTVYAWLIF-L 184

Query: 185 ALTIAASLLTGWLFLRWKFPAALLLGGVAI--SIGTHITGLTEGGVPSWLSLPVYVLIGC 242
           AL +  SLL G        PA  +L  + I  S     TG+ +  +P W+ +    L+G 
Sbjct: 185 ALALM-SLLLGKASTLLGIPAPYMLAALLITASFNGFATGI-DMQLPKWMVIFATALLGI 242

Query: 243 LIGTRFSNVSLMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGLE 302
           LIG+R ++ +L E      AG +VT+  +++A  ++ + S +       +++++ PG +E
Sbjct: 243 LIGSRIADTTLREAMAYSRAGVMVTMIGLLVAVGVSGVFSILIDKSWVVLLLSWVPGSVE 302

Query: 303 TMAAMAVMMHADTAYVGSHHVIRLLFLSVLMPLVMGKDARKRDG 346
            M A+A+++  + A+V  +H +RLL L  L P ++ K   +  G
Sbjct: 303 AMTAVALLLGMEPAFVMINHALRLLLLYSL-PAMLKKQLEELRG 345