Pairwise Alignments

Query, 546 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

Subject, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  566 bits (1458), Expect = e-166
 Identities = 289/522 (55%), Positives = 377/522 (72%), Gaps = 1/522 (0%)

Query: 9   LLSVRDLSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAA 68
           +L + +LSV F   G      + VS  +  GE +ALVGESGSGKSVTAN+IL+LLP  +A
Sbjct: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64

Query: 69  SHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIGEILELHQA 128
            + SG I F   D L   ERALR +RG  I MIFQEPM SLNPLH I +Q+ E L +H+ 
Sbjct: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124

Query: 129 ITGAEARQRTLELLLQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRPKLLIADEPT 188
           +    A Q+ +E L +VGIR PE ++ AYPHELSGG+RQRVMIAMAL N P+LLIADEPT
Sbjct: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184

Query: 189 TALDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKIVETGTVEQV 248
           TALDV+VQAQIL+LL  L+ + GM+MLFITHDL IVR+ ADRV VM  G++VET     +
Sbjct: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244

Query: 249 FTDPQHAYTRHLLAAEPKGEPPHSDASKPVVMQGDDIKVWFPIKAGLMRRVIDHVKAVDG 308
           F  P H YT+ L+ A+P+G P  +    P ++Q + ++VWFPIK G  RR   ++KAV  
Sbjct: 245 FAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTD 304

Query: 309 IDITLRAGQTVGVVGESGSGKTTLGLALSRLIASKGRISFIGQSIDSYSYEMMKPLRNRL 368
           +  TL  GQ++G+VGESGSGK+T G+A+ +L+AS+G I F GQ + +     M P R+++
Sbjct: 305 MSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKM 364

Query: 369 QVVFQDPYGSLSPRMSVGEIIAEGLKVHERSLSADERDTRVATALEEVGLDPATRWRYPH 428
           QVVFQDPY +L+PRMSV ++I EGL+VH + L+ DE D  +   ++EVGLD  TR RYP+
Sbjct: 365 QVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGLDVDTRHRYPN 423

Query: 429 EFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQAKHELAYLFISH 488
           EFSGGQRQRIAIARA+VLKP F++LDEPTS+LD +VQAQV+DLL+DLQ K++L YLFISH
Sbjct: 424 EFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISH 483

Query: 489 DLRVVKALANDLIVMRHGKVVESGPAAEIFANPQQDYTKALL 530
           DL V++AL +  IVM+ G++VE G    +F NP   YT+ L+
Sbjct: 484 DLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525



 Score =  159 bits (403), Expect = 2e-43
 Identities = 100/264 (37%), Positives = 160/264 (60%), Gaps = 19/264 (7%)

Query: 279 VMQGDDIKVWFPIKAGLMRRVIDHVKAVDGIDITLRAGQTVGVVGESGSGKTTLGLALSR 338
           V++ D++ V F I AG  R V       +G+ +T+  G+T+ +VGESGSGK+    A+ R
Sbjct: 5   VLKIDNLSVGFGI-AGQARPV------TEGVSLTIARGETLALVGESGSGKSVTANAILR 57

Query: 339 LIASKGRISFIGQSIDSYSYEMMK----PLRN----RLQVVFQDPYGSLSPRMSVGEIIA 390
           L+  KG   ++  SI     + ++     LR     R+ ++FQ+P  SL+P   +G+ + 
Sbjct: 58  LLP-KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLV 116

Query: 391 EGLKVHERSLSADERDTRVATALEEVGL-DPATRWR-YPHEFSGGQRQRIAIARAMVLKP 448
           E L +H R L A   + +    L +VG+  P  +   YPHE SGG+RQR+ IA A++ +P
Sbjct: 117 ETLAIH-RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEP 175

Query: 449 RFVMLDEPTSALDMSVQAQVVDLLRDLQAKHELAYLFISHDLRVVKALANDLIVMRHGKV 508
             ++ DEPT+ALD+SVQAQ++DLL+ LQ +  +A LFI+HDL +V+ +A+ + VM+ G++
Sbjct: 176 ELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQL 235

Query: 509 VESGPAAEIFANPQQDYTKALLAA 532
           VE+     +FA P   YT+ L+ A
Sbjct: 236 VETNACHTLFAAPAHPYTQQLINA 259