Pairwise Alignments

Query, 546 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  464 bits (1195), Expect = e-135
 Identities = 256/530 (48%), Positives = 356/530 (67%), Gaps = 16/530 (3%)

Query: 9   LLSVRDLSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAA 68
           LL VR+LSV FH       AV  +S+ L  GE +A++GESGSGKSV++++I+ L+  P  
Sbjct: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64

Query: 69  SHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIGEILELHQA 128
              SG+IL DG+D+LT+P    R V G  + MIFQ+P++ LNP++++  QI E +  H  
Sbjct: 65  RISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH-G 123

Query: 129 ITGAEARQRTLELLLQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRPKLLIADEPT 188
           + G++AR+  L LL +VGI EPE+ ++ YPHE SGGQRQRVMIAMALA RP LLIADEPT
Sbjct: 124 LAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPT 183

Query: 189 TALDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKIVETGTVEQV 248
           TALDVTVQA++L+LL +L+ + GM++L ITHDLG+V + ADRV VM KG IVE GTV ++
Sbjct: 184 TALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREI 243

Query: 249 FTDPQHAYTRHLLAAEPKGEPPHSDASK--PVVMQGDDIKVWFPIKAGLMRRVIDHVKAV 306
           + +PQH YT+ L+AA P     H   ++  P++   D            +R+     +A+
Sbjct: 244 YKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRD------------VRKTYGSFEAL 291

Query: 307 DGIDITLRAGQTVGVVGESGSGKTTLGLALSRL-IASKGRISFIGQSIDSYSYEMMKPLR 365
            GI   L  G+T+ VVGESGSGK+TL  AL RL     G   + G+ + + S   +  LR
Sbjct: 292 KGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLR 351

Query: 366 NRLQVVFQDPYGSLSPRMSVGEIIAEGLKVHERSLSADERDTRVATALEEVGLDPATRWR 425
             LQ+VFQDP  SL+PRM+V ++I+E   +H   L   +   RVA  L +VGL      R
Sbjct: 352 RDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSR 411

Query: 426 YPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQAKHELAYLF 485
           YPH+FSGGQRQRIAIARA+ L+P+ ++ DE  SALD+SVQAQV++LL  L+ +  +A++F
Sbjct: 412 YPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIF 471

Query: 486 ISHDLRVVKALANDLIVMRHGKVVESGPAAEIFANPQQDYTKALLAAAFN 535
           I+HDL VV+  A+ ++VM+ G+VVE G   E+F  P+Q YT+ALLAA+ +
Sbjct: 472 IAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASLS 521



 Score =  215 bits (548), Expect = 3e-60
 Identities = 124/264 (46%), Positives = 171/264 (64%), Gaps = 13/264 (4%)

Query: 7   QPLLSVRDLSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYP 66
           +PLLSVRD+   +     +  A+  +SFDLMPGE +A+VGESGSGKS  A ++L+L    
Sbjct: 273 EPLLSVRDVRKTY----GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRL---- 324

Query: 67  AASHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIGEILELH 126
                SG  L+ G+D+  L    L  +R  D+ M+FQ+P  SLNP  T+ + I E   +H
Sbjct: 325 -DEPDSGTALWKGRDLFALSPAELYKLR-RDLQMVFQDPTQSLNPRMTVYQLISEAWVIH 382

Query: 127 QAITG-AEARQRTLELLLQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRPKLLIAD 185
             I   A+ R+R  ELL+QVG+    + +  YPH+ SGGQRQR+ IA ALA  P+L+I D
Sbjct: 383 PDILPKAKWRERVAELLVQVGLSA--EHMSRYPHQFSGGQRQRIAIARALALEPQLIICD 440

Query: 186 EPTTALDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKIVETGTV 245
           E  +ALDV+VQAQ++ELL  L+ + G++ +FI HDL +VR FAD V VM +G++VE GTV
Sbjct: 441 EAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTV 500

Query: 246 EQVFTDPQHAYTRHLLAAEPKGEP 269
            +VF  P+ AYTR LLAA    +P
Sbjct: 501 REVFDTPRQAYTRALLAASLSPDP 524