Pairwise Alignments

Query, 546 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  449 bits (1156), Expect = e-130
 Identities = 244/530 (46%), Positives = 346/530 (65%), Gaps = 8/530 (1%)

Query: 9   LLSVRDLSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAA 68
           LL V+DL+V F   G    A   VSF +  GE + ++GESGSGKSV+A++I+ L+  P  
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 69  SHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIGEILELHQA 128
              +G + + G+D+ +L E   R + G  I MIFQ+P++ LNP++TI  Q+ E+  +H  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 129 ITGAEARQRTLELLLQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRPKLLIADEPT 188
            +GAEARQR +E+L +VGI EPEKR+  YPH+ SGGQRQR+MI MA+A RP++LIADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 189 TALDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKIVETGTVEQV 248
           TALDV+VQAQILELL  L+ + G++++ ITHDL +    ADRV VM  G+IVE G    V
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 249 FTDPQHAYTRHLLAAEPKGEP-----PHSDASKPVVMQGDDIKVWFPIKAGLMRRVIDHV 303
           F +P H+YTR L+ A P  +      P   A KP +++  +I  ++ + +G   +    +
Sbjct: 246 FENPAHSYTRTLINALPHADDRAPPRPARPAGKP-ILEVKNIDKFYTLSSGFFAKPA-RL 303

Query: 304 KAVDGIDITLRAGQTVGVVGESGSGKTTLGLALSRL-IASKGRISFIGQSIDSYSYEMMK 362
            AV  +   + AG+T+G+VGESGSGK+T+   L  L  AS G   F G+ +     + + 
Sbjct: 304 HAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLL 363

Query: 363 PLRNRLQVVFQDPYGSLSPRMSVGEIIAEGLKVHERSLSADERDTRVATALEEVGLDPAT 422
             R ++Q+VFQDPY S++PRM+V +I++E  ++H+  L       RV   L  VGL+P  
Sbjct: 364 AFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEH 423

Query: 423 RWRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQAKHELA 482
             RYPH+FSGGQRQRIAIARA+   P  V+ DE  SALD+SVQ QV+DLL +L+ +  LA
Sbjct: 424 AKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLA 483

Query: 483 YLFISHDLRVVKALANDLIVMRHGKVVESGPAAEIFANPQQDYTKALLAA 532
           Y+FI+HDL +V+  A+ +IVM+ G++VE     EIF NPQ  YT+ L+ A
Sbjct: 484 YIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533



 Score =  202 bits (514), Expect = 3e-56
 Identities = 119/267 (44%), Positives = 166/267 (62%), Gaps = 15/267 (5%)

Query: 7   QPLLSVRD------LSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSIL 60
           +P+L V++      LS  F    A   AV ++SFD+  GE + +VGESGSGKS  A  +L
Sbjct: 278 KPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLL 337

Query: 61  KLLPYPAASHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIG 120
            L          G+ LF G+D+L +  + L A R   + M+FQ+P +S+NP  T+   + 
Sbjct: 338 GL-----NEASGGEALFHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVS 391

Query: 121 EILELHQAITGAEA-RQRTLELLLQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRP 179
           E   +H+ I      R R  ELL  VG+  PE   K YPH+ SGGQRQR+ IA ALA  P
Sbjct: 392 EPWRIHKDILEKTRWRDRVTELLGLVGLN-PE-HAKRYPHQFSGGQRQRIAIARALACDP 449

Query: 180 KLLIADEPTTALDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKI 239
           +L++ DE  +ALDV+VQ Q+++LL +L+ + G++ +FITHDL IVR FADR+ VM  G+I
Sbjct: 450 ELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEI 509

Query: 240 VETGTVEQVFTDPQHAYTRHLLAAEPK 266
           VE  T E++F +PQHAYTR L+ A PK
Sbjct: 510 VEHATTEEIFRNPQHAYTRQLINATPK 536