Pairwise Alignments

Query, 364 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  162 bits (409), Expect = 1e-44
 Identities = 107/357 (29%), Positives = 171/357 (47%), Gaps = 49/357 (13%)

Query: 4   YILRRLALMIPTIVGIMGISFLVIQFAPGGPVEQVVAQLTGQGDSASDRLSGGGDLMGQS 63
           + LRR+  +IPT+V +  + F++    PG     + A                       
Sbjct: 4   FTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFAD---------------------- 41

Query: 64  GGFDESGSKYRGAQGLDPELIKKLEKQFGFDKPPLTRFLEMMWNYIRFDFGDSFFRNSSV 123
                      G +  DP++I +L ++FG +KP + RF+  + +  +FD G SF     V
Sbjct: 42  -----------GRRAADPQMIARLNEEFGLNKPLMERFVTYVTDLAQFDLGTSFRTRQPV 90

Query: 124 IDLIIDKLPVSASLGFWILIISYVISIPLGIKKAVSDGSTFDVWTSGIIIIGYAVPSFLF 183
           IDLI D++  S  L    +I + VIS+PLG   A+  GS  D  T    + G ++P F  
Sbjct: 91  IDLINDRMWASLQLAIAAMIFALVISVPLGFVAALRPGSVLDTVTMIGAVSGLSMPQFWL 150

Query: 184 GILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLPLIALSLSAFATTTL 243
           G+L++ LFA     +W P  G    +F              +L LP + L ++  A    
Sbjct: 151 GLLMMYLFA--LQLNWLPSFGYGDGSFR-------------NLILPAVTLGVTPLALLAR 195

Query: 244 LTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFPGAFISAFFTGSLLI 303
            T+   +D +   ++ TA +KG+SE KV+  HV RNA+++++    G    +    +++I
Sbjct: 196 TTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVTTV-GLQFGSLIGQAVVI 254

Query: 304 ENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLIYTWIDPRIDFE 360
           E +F+  G+G L   SV +RD P+V GT+ +  L  LV+    DLIY  IDPRI  E
Sbjct: 255 EKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVDLIYAAIDPRIKQE 311