Pairwise Alignments

Query, 364 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 367 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  449 bits (1155), Expect = e-131
 Identities = 218/368 (59%), Positives = 288/368 (78%), Gaps = 7/368 (1%)

Query: 1   MGAYILRRLALMIPTIVGIMGISFLVIQFAPGGPVEQVVAQLTGQGDSASDRLSGGGDLM 60
           M AYILRRLAL+  T+ GI+ ++FL++Q APGGPVEQV+++L G    A+ R SG G   
Sbjct: 1   MIAYILRRLALIPLTLFGIILVNFLIVQIAPGGPVEQVLSRLQGMDGGATARFSGSGG-- 58

Query: 61  GQSGGFDESGS-----KYRGAQGLDPELIKKLEKQFGFDKPPLTRFLEMMWNYIRFDFGD 115
           G++GG   + +      YRGA+GLDP  +K LE QFGFD+P   RFL+M+ +Y+ FD G 
Sbjct: 59  GEAGGGSATSALGPTTAYRGARGLDPAYVKSLEVQFGFDRPAHERFLKMVGDYLTFDLGQ 118

Query: 116 SFFRNSSVIDLIIDKLPVSASLGFWILIISYVISIPLGIKKAVSDGSTFDVWTSGIIIIG 175
           S++R+  VIDLI++K+PVS SLG W  +I Y++SIPLGI KAV DGS FD+ TS ++++G
Sbjct: 119 SYYRSIPVIDLILEKMPVSLSLGIWSTMIIYLVSIPLGIAKAVRDGSRFDMATSWMVVVG 178

Query: 176 YAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLPLIALSL 235
           YAVPSFLF ILLI++FAGG +FDWFPLRG++SDN+ +L+W Q  +DY WH+ LP+ AL +
Sbjct: 179 YAVPSFLFAILLIIVFAGGRYFDWFPLRGILSDNWRELSWPQLALDYLWHMVLPVTALVI 238

Query: 236 SAFATTTLLTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFPGAFISA 295
             FA+ T+LTKNSF++EI+KQYV+TARAKGL+E K+LY HVFRNAML+V+AGFP A +S 
Sbjct: 239 GGFASLTMLTKNSFLEEIRKQYVITARAKGLTESKILYRHVFRNAMLLVVAGFPAALVSM 298

Query: 296 FFTGSLLIENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLIYTWIDP 355
            FTGS+LIE IFSLDGLG LG+ S +NRDYP++FGTL+IF L+GL++ L+SD  Y  IDP
Sbjct: 299 LFTGSVLIEVIFSLDGLGLLGFESTMNRDYPVMFGTLYIFGLIGLLLSLISDATYHIIDP 358

Query: 356 RIDFERRD 363
           RIDFE R+
Sbjct: 359 RIDFESRE 366