Pairwise Alignments

Query, 364 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 358 a.a., microcin C ABC transporter permease YejB from Pseudomonas fluorescens SBW25-INTG

 Score =  473 bits (1217), Expect = e-138
 Identities = 231/363 (63%), Positives = 288/363 (79%), Gaps = 6/363 (1%)

Query: 1   MGAYILRRLALMIPTIVGIMGISFLVIQFAPGGPVEQVVAQLTGQGDSASDRLSGGGDLM 60
           M AYI RRL L+IPT+ GI+ I+F++IQ APGGPVEQ++A+L G  + A+ R++GGG  +
Sbjct: 1   MLAYIFRRLLLIIPTLFGILLINFVIIQAAPGGPVEQMIAKLEGF-EGATSRIAGGGAEV 59

Query: 61  GQSGGFDESGSKYRGAQGLDPELIKKLEKQFGFDKPPLTRFLEMMWNYIRFDFGDSFFRN 120
             +G      S YRGAQGLDP LIK++EK +GFDK    R   M+ NY + DFGDSFFR+
Sbjct: 60  SVAGS-----SSYRGAQGLDPTLIKEIEKMYGFDKSAPERLWIMVKNYAQLDFGDSFFRD 114

Query: 121 SSVIDLIIDKLPVSASLGFWILIISYVISIPLGIKKAVSDGSTFDVWTSGIIIIGYAVPS 180
           + VIDLI +K+PVS SLG W  +I Y++SIPLGI KA   GS FDVWTS  II+GYA+P+
Sbjct: 115 AKVIDLIKEKMPVSISLGLWSTLIMYLVSIPLGIAKATRHGSHFDVWTSSAIIVGYAIPA 174

Query: 181 FLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLPLIALSLSAFAT 240
           FLF ILLIV+FAGGS+FDWFPLRGL S+NFD+L+W  K++DYFWHL LP+ AL +  FAT
Sbjct: 175 FLFAILLIVVFAGGSYFDWFPLRGLTSNNFDELSWGGKVLDYFWHLALPITALVIGNFAT 234

Query: 241 TTLLTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFPGAFISAFFTGS 300
            TLLTKNSF+DEI KQYV+TA+AKGL+  +VLYGHVFRNAML+VIAGFP AFI  FFTGS
Sbjct: 235 MTLLTKNSFLDEINKQYVITAKAKGLTNHRVLYGHVFRNAMLLVIAGFPSAFIGIFFTGS 294

Query: 301 LLIENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLIYTWIDPRIDFE 360
           LL+E IFSLDGLG + + + +NRDYP+VFGTLFIF+L+GL+V L+ DL YT +DPRIDF 
Sbjct: 295 LLVEVIFSLDGLGLMSFEAAINRDYPVVFGTLFIFTLLGLIVKLIGDLTYTLVDPRIDFA 354

Query: 361 RRD 363
            R+
Sbjct: 355 SRE 357