Pairwise Alignments

Query, 614 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 610 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  416 bits (1070), Expect = e-120
 Identities = 242/614 (39%), Positives = 339/614 (55%), Gaps = 31/614 (5%)

Query: 10  ILIALAASALLIPAVASAQSTDVWRKGISTVGELKHPDGFDHFDYVNTKAPKGGTLRLST 69
           +L+ L + AL  PA A+   +     G +  G LK+P  F HFD+VN +APKGG LR+  
Sbjct: 5   LLLFLISLALSSPASATISESH----GYAQFGTLKYPARFTHFDWVNPQAPKGGVLRVMA 60

Query: 70  SGTFDTLNPLLAKGERAT--------GLSLVYDTLMKSTEE------ELSASYGLLAEGV 115
            GTFDTLNP   KG            G++ + + LM  T +      E ++SYGL+A+ V
Sbjct: 61  FGTFDTLNPYTFKGSSPVSTPNFLQYGINELNEPLMVGTGQYAPSGDEPTSSYGLIAQSV 120

Query: 116 SYPDDIEKATFRLRQDAKWADGKPVTPEDVVFSFEKA-KDLSPQLATYYTHVTKAEVSGE 174
            Y +D     F LR +A++ DG P+T  DV FS+    KD  PQ  T    V + ++   
Sbjct: 121 EYSEDRSWVVFNLRPEARFHDGVPITAYDVAFSYRTLLKDGHPQYRTNLQEVLRVDILNP 180

Query: 175 RDITFTFDEKNNRELPQIVGQLLIVPKHWWEGTGPDGKPRDISRGTLEPVMGSGPYKIAA 234
             I F F    N  L   +G+L ++P+H+W+G       RD    T EP +GSGPY+I  
Sbjct: 181 LKIRFVFKRSGNPLLILRLGELPVLPQHYWKG-------RDFKATTFEPPLGSGPYRITK 233

Query: 235 VSPGSSVTYERRDDYWGKDVNVNVGMNNFKTIAYTFFADQDVEFQAFKSGTVDFRQEASS 294
           V PG  + +ER  DYWGKD+ VN G  N+  +   F+ D +V F+AFK+G  D   E  +
Sbjct: 234 VQPGRQLVFERVKDYWGKDLPVNRGKYNYDRMDVEFYRDSEVAFEAFKAGEFDIYIEHQA 293

Query: 295 SRWVTGYDFPAVKEGRVKKEELPNIYRSVGIMQAFVPNMRREKFQNPKLRKALNYAFDFE 354
             W  GY FPAV  G V K ++P+   +    Q    N RR  F   K+R+AL   FDFE
Sbjct: 294 KNWANGYQFPAVNRGDVIKAQIPHQIPTQ--TQGLFMNTRRGTFAEVKVREALGLMFDFE 351

Query: 355 ELNRTLAYGQFQRITSFFMGSELASSGLPTGRELEILQELKDQVPPEVFTTEYRNPVAGD 414
             NRTL  G ++R  S++  SE +++GLP G E  +L+  +DQ+PP++ T  +  P    
Sbjct: 352 WTNRTLFSGAYKRTLSYYPNSEFSATGLPVGHEWLLLKPYRDQLPPKLLTEPFSLPKTDG 411

Query: 415 PAKQRDNLREAVKLMKEAGYELRGNRMVNAATGQQLDMEFLIDSSGMERTILPYVQNLKK 474
               R+ LR+A+ L+KEAG+ L G R++NA   Q L  E L+ +  +ER + PYV+NL  
Sbjct: 412 RGIPRETLRKALGLLKEAGWNLNGQRLLNA-DHQPLSFEILLVNPNLERILQPYVENLAS 470

Query: 475 IGINATIRTVDASQYTNRTRSFDFDVTIKLWATSANPGNEQADFWGSAAADRQGSNNLAG 534
           IG+ A +RTVD +QY  R   FDFD+ +     + +PG EQ  ++ S+    +GS N AG
Sbjct: 471 IGVQARLRTVDRAQYKQRLDQFDFDMILLTLNQTLSPGLEQWQYFHSSQVGVKGSKNYAG 530

Query: 535 IKNPAVDALVRKVIFAPNRDEQVAAARALDRVLLANSYVIPQFYRGEMFIAYWNTLIRPE 594
           I NP VD L+ K++ A  RDEQVAA +ALDRVLL   Y IP +Y     +AY N      
Sbjct: 531 IANPVVDHLLEKLLAAQTRDEQVAAGKALDRVLLWQHYCIPNWYLNYHRLAYRNRFAF-V 589

Query: 595 NLPEYGVGFPDAWW 608
             P Y +G   AWW
Sbjct: 590 TTPPYTLGL-SAWW 602