Pairwise Alignments

Query, 614 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 602 a.a., peptide ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

 Score =  443 bits (1140), Expect = e-129
 Identities = 247/611 (40%), Positives = 355/611 (58%), Gaps = 19/611 (3%)

Query: 10  ILIALAASALLIPAVASAQSTDVWRKGISTVGELKHPDGFDHFDYVNTKAPKGGTLRLST 69
           IL AL   A   P  A A         I+  G+  +P  F HF YVN  APKGGTLR + 
Sbjct: 4   ILFALLCLAFF-PLAARADPPAKAVHAIAMHGDPAYPADFAHFAYVNPDAPKGGTLRQAV 62

Query: 70  SGTFDTLNPLLAKGERATGLSLVYDTLMKSTEEELSASYGLLAEGVSYPDDIEKATFRLR 129
           +G FDTLNP + KG  A GL LV++T++  + +E  + YGLLAE +  P+D   A F L 
Sbjct: 63  TGGFDTLNPHVVKGVPALGLGLVFETMLARSWDEPFSLYGLLAESLEVPEDRGAAVFHLN 122

Query: 130 QDAKWADGKPVTPEDVVFSFEKAKDL-SPQLATYYTHVTKAEVSGERDITFTF----DEK 184
             A+W DG PVT  DV+FS E  +   +P    +Y  V  A    ER + F F    D +
Sbjct: 123 PAARWHDGTPVTAADVLFSLEVQRAHGTPNRRQFYAKVASAAAPDERTVRFIFATGPDGR 182

Query: 185 NNRELPQIVGQLLIVPKHWWEGTGPDGKPRDISRGTLEPVMGSGPYKIAAVSPGSSVTYE 244
            +RE+P ++G + I  K WW G       RD +  TL+P +GSGPY++  V  G  + YE
Sbjct: 183 FDREMPLLMGLMPIHAKAWWAG-------RDFAATTLDPPLGSGPYRVKQVEAGRRIVYE 235

Query: 245 RRDDYWGKDVNVNVGMNNFKTIAYTFFADQDVEFQAFKSGTVDFRQEASSSRWVTGYDFP 304
           R  +YWG+D+    G+ N  T+ +T++ D  V  +AF +G  D R+E+  ++W TGYD P
Sbjct: 236 RVTNYWGRDLPSRRGLFNAGTLDFTYYRDDSVALEAFLAGQGDVRRESDPAKWATGYDGP 295

Query: 305 AVKEGRVKKEELPNIYRSVGIMQAFVPNMRREKFQNPKLRKALNYAFDFEELNRTLAYGQ 364
           A++ GR+  EELP  +R     +  + N RR  FQ+ ++R+AL  A DF  + +TL +G 
Sbjct: 296 ALRTGRIVLEELP--HRRPEFARGLIFNTRRPLFQDIRVRRALGLATDFAWIGKTLFHGA 353

Query: 365 FQRITSFFMGSELASSGLPTGRELEILQELKDQVPPEVFTTEYRNPVA--GDPAKQRDNL 422
             R  S++  SELA+ G+P   EL +L+  +D++P E+FTT +  P    G PA  RDNL
Sbjct: 354 LVRTASYYPNSELAAEGVPGPEELAVLEPFRDRLPLELFTTPFTLPRTDGGGPAGARDNL 413

Query: 423 REAVKLMKEAGYELRGNRMVNAATGQQLDMEFLIDSSGMERTILPYVQNLKKIGINATIR 482
           REA++L+ EAG+ + G R+ + A G+    E L+ +   ER  L Y ++L+++GI  T+R
Sbjct: 414 REALRLLAEAGWRVSGGRLTDGA-GRPFAFEILLGNPADERVALEYARSLERLGIAVTVR 472

Query: 483 TVDASQYTNRTRSFDFDVTIKLWATSANPGNEQADFWGSAAADRQGSNNLAGIKNPAVDA 542
           TVD +QY  R   FDFD+T++ W +S +PGNEQ  ++GS AAD+ GS N  GI++P VDA
Sbjct: 473 TVDNAQYQARLDRFDFDMTLRWWISSLSPGNEQLYYYGSEAADQPGSRNYPGIRDPVVDA 532

Query: 543 LVRKVIFAPNRDEQVAAARALDRVLLANSYVIPQFYRGEMFIAYWNTLIRPENLPEYGVG 602
           +   +  A  RD  VA  RALDRVLL   Y++P F+     +A W+ L  PE  P YG  
Sbjct: 533 IAASIAEARTRDALVARVRALDRVLLWGHYMVPLFHSPTDRMARWSRLKHPEATPLYG-P 591

Query: 603 FPDAWWSGKAG 613
             ++WW  + G
Sbjct: 592 LVESWWIEEGG 602