Pairwise Alignments

Query, 614 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 604 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  425 bits (1092), Expect = e-123
 Identities = 237/611 (38%), Positives = 350/611 (57%), Gaps = 27/611 (4%)

Query: 8   SRILIALAASALLIPAVASAQSTDVWRKGISTVGELKHPDGFDHFDYVNTKAPKGGTLRL 67
           S +++ LAAS+    A+A+          I+  G+   P  F HF YVN +  KGG +  
Sbjct: 6   SGLVMLLAASSFATGALAAPVHA------IAMHGDPALPADFKHFPYVNPQVKKGGKIAY 59

Query: 68  STSGTFDTLNPLLAKGERATGL--------SLVYDTLMKSTEEELSASYGLLAEGVSYPD 119
              GTFD+LNP + K  R T          +LVY++LM+ +++E    YGLLAE V + D
Sbjct: 60  GVVGTFDSLNPFILKSMRTTARGMWDPGFGNLVYESLMQRSQDEPFTMYGLLAETVEWDD 119

Query: 120 DIEKATFRLRQDAKWADGKPVTPEDVVFSFEKAKDLS-PQLATYYTHVTKAEVSGERDIT 178
           D     F L   A+WADG+PVT EDV+F+FE  +D      +   + V K E  GER + 
Sbjct: 120 DRTFIQFNLNPKARWADGRPVTAEDVIFTFELLRDKGRAPFSNRLSKVAKMEKVGERSVR 179

Query: 179 FTFDEKNNRELPQIVGQLLIVPKHWWEGTGPDGKPRDISRGTLEPVMGSGPYKIAAVSPG 238
           FTF E+ +RE+P ++G   ++PKH               R +LEP +GSGPY++A V PG
Sbjct: 180 FTFTEEADREIPLLLGLSPVLPKHAIN-------VETFDRTSLEPPLGSGPYRVAEVRPG 232

Query: 239 SSVTYERRDDYWGKDVNVNVGMNNFKTIAYTFFADQDVEFQAFKSGTVDFRQEASSSRWV 298
             + Y R  DYW KD+   VG++N+  I+  +F  ++  F+AFK G VD   E S+++W 
Sbjct: 233 ERIVYRRNPDYWAKDLPSKVGLDNYDEISVEYFLQENTLFEAFKKGVVDIYAEGSATKWA 292

Query: 299 TGYDFPAVKEGRVKKEELPNIYRSVGIMQAFVPNMRREKFQNPKLRKALNYAFDFEELNR 358
             YDFPAV+ G V KE      ++   M  FV N RR  F N KLR+ L   FDFE +N+
Sbjct: 293 RAYDFPAVRSGNVIKETFKP--KTPSGMLGFVFNTRRPMFDNIKLRQGLALVFDFEWVNK 350

Query: 359 TLAYGQFQRITSFFMGSELASSGLPT-GRELEILQELKDQVPPEVFTTEYRNPVAGDPAK 417
            L  G + R  S++  S L+  G+    REL+++ ++++++ P +    YR PV     +
Sbjct: 351 NLFDGAYTRTQSYWQNSSLSFLGVAADNRELDLMGDVRERINPAILDGSYRLPVTDGSGR 410

Query: 418 QRDNLREAVKLMKEAGYELRGNRMVNAATGQQLDMEFLIDSSGMERTILPYVQNLKKIGI 477
            R+ LREAV L++EAGY ++  +MV+A  G  L  E +  ++G E+  L Y + L  +GI
Sbjct: 411 DRNVLREAVTLLREAGYSIKDGKMVDAK-GTPLAFEIMSQNAGQEKVALAYQRFLAPLGI 469

Query: 478 NATIRTVDASQYTNRTRSFDFDVTIKLWATSANPGNEQADFWGSAAADRQGSNNLAGIKN 537
            A +RTVD SQY  R++SFD+DV IK + +S +PG EQ + W S   DRQGS+N AG+ +
Sbjct: 470 AARVRTVDDSQYQLRSQSFDYDVIIKSFPSSLSPGLEQINRWSSQTRDRQGSDNFAGVAD 529

Query: 538 PAVDALVRKVIFAPNRDEQVAAARALDRVLLANSYVIPQFYRGEMFIAYWNTLIRPENLP 597
             VD L+  ++ A N ++  AA RA DR+L+ NSY++P ++    +IA W  + RP  +P
Sbjct: 530 KDVDKLINNILQARNPEDFTAAVRAHDRLLVNNSYLVPLYHLDAQWIARWKHIGRPTTVP 589

Query: 598 EYGVGFPDAWW 608
            YG   P +WW
Sbjct: 590 LYGYQLP-SWW 599