Pairwise Alignments

Query, 614 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 127/556 (22%), Positives = 213/556 (38%), Gaps = 117/556 (21%)

Query: 57  TKAPKGGTLRLSTSGTFDTLNPLLAK-GERATGLSLVYDTLMKSTEEELSASYGLLAEGV 115
           T A + G LR++TS    TL+P  A   E  + LS +Y+ L+   ++ L    GL     
Sbjct: 27  TLAQERGELRIATSYKLMTLDPQYANLNENTSLLSHIYERLVYQ-DDNLELKPGLATSWR 85

Query: 116 SYPDDIEKATFRLRQDAKWADGKPVTPEDVVFSFEKAKD-LSPQLATYYTHVTKAEVSGE 174
              D   +  F+LR   ++ DG     +DVV++ E+ +D L P    + ++V+  +    
Sbjct: 86  PLSDT--QWAFKLRDKVRFHDGSAFDADDVVYTIERIRDFLKPPSGGFRSYVSGIKSVSA 143

Query: 175 RDITFTFDEKNNR--ELPQIVGQLLIV--PKHWWEGTGPDGKPRDISRGTLEPVMGSGPY 230
            D      E +     LP     L ++  P   +E T       +++ G   P  G+GPY
Sbjct: 144 PDPLTVLIETDGAVPNLPLFFSSLFVMNRPSKGFETT------ENLNAG--HPPNGTGPY 195

Query: 231 KIAAVSPGSSVTYERRDDYWGKDVNVNVGMNNFKTIAYTFFADQDVEFQAFKSGTVDF-- 288
           +  + S G S+   R DDYWG       G   +  + +    +      A  +G VD   
Sbjct: 196 RFESWSSGESLRLARNDDYWG-------GKPAWSKVTFRVIENPAARVAALSTGEVDVAH 248

Query: 289 ----RQEASSSRWVTGYDFPAVKEGRVK-------KEELPNIYRSVGIMQAFVPNMRREK 337
               R  AS  +   G    +V   RV        ++ LP +    G   A         
Sbjct: 249 AIPARDVASLKQ--RGAKIASVGAARVNFVQFDVARDTLPGVTDKSGEPIA-------NP 299

Query: 338 FQNPKLRKALNYAFDFEEL-NRTLA-YGQFQRITSFFMGSELASSGLPTGRELEILQELK 395
           F+NP +R+AL  A D   L ++ LA YG           +++  +GLP G    +L E  
Sbjct: 300 FKNPLVRRALTLATDRGILVDKILAGYGT--------AAAQVFPNGLP-GTSANLLPE-- 348

Query: 396 DQVPPEVFTTEYRNPVAGDPAKQRDNLREAVKLMKEAGYELRGNRMVNAATGQQLDMEFL 455
                                    N  EA  L+ +AG+    N ++    G+       
Sbjct: 349 -----------------------APNYDEAKMLLAKAGFPDGFNLVLAGPAGRY------ 379

Query: 456 IDSSGMERTILPYVQNLKKIGINATIRTVDASQYTNRTRSFDFD----------VTIKLW 505
               G   ++    Q+  +IG+NA       S +  +  + D+           V I L 
Sbjct: 380 ---PGDAESLQAVAQSWARIGVNAQPAAAPFSVFNTKRAAGDYGVWYGGTSGEAVDIILH 436

Query: 506 ATSANPGNEQADFWGSAAADRQGSNNLAGIKNPAVDALV---RKVIFAPNRDEQVAAARA 562
           +  A+P  E+            G+ N    +N A DA++     +   P R+  +A A  
Sbjct: 437 SLLASPDPERG----------TGALNFGKYRNEAFDAMLAGAESIAVGPERNAALAQATE 486

Query: 563 LDRVLLANSYVIPQFY 578
           L   ++A+  +IP ++
Sbjct: 487 L---VMADQPIIPLYH 499