Pairwise Alignments

Query, 258 a.a., ABC transporter, nucleotide binding/ATPase protein (phosphonate) from Agrobacterium fabrum C58

Subject, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (350), Expect = 1e-37
 Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 11/231 (4%)

Query: 24  NVSFELYPGEVLAIVGESGSGKTTLLNCISTRLMPTAGSVEYRMRDGSVRDLYHMGEAER 83
           ++SF L  G+ L +VGESGSGK+T    I  +L+ + G++ +  +D        +   +R
Sbjct: 304 DMSFTLAKGQSLGLVGESGSGKSTTGMAI-LKLLASQGAIRFAGQD--------LQALKR 354

Query: 84  RFLM--RTDWGFVHQNPADGLRMAVSAGANVGERLMAVGNRHYGNIRQSASEWLERVEIG 141
           R ++  R+    V Q+P   L   +S    +GE L      +   I  +    ++ V + 
Sbjct: 355 REMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLD 414

Query: 142 TDRIDDQPRAFSGGMRQRLQIARNLVTSPRLVFMDEPTGGLDVSVQARLLDLVRGLVNDL 201
            D     P  FSGG RQR+ IAR LV  P  + +DEPT  LD +VQA++LDL++ L    
Sbjct: 415 VDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKY 474

Query: 202 GLAVVVVTHDLAVARLLSHRMMVMKGGDVIEHGLTDRVLDDPREPYTQLLV 252
            L  + ++HDLAV R L H  +VMK G+++EHG T  + ++P  PYTQ LV
Sbjct: 475 QLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525



 Score =  136 bits (342), Expect = 1e-36
 Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 14/259 (5%)

Query: 6   LLKVRDVSKYYGDRAGCR----NVSFELYPGEVLAIVGESGSGKTTLLNCISTRLMPTAG 61
           +LK+ ++S  +G     R     VS  +  GE LA+VGESGSGK+   N I  RL+P  G
Sbjct: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAI-LRLLPK-G 62

Query: 62  SVEYRMRDGSVR----DLYHMGEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLM 117
           S  Y    GS+     D     E   R +     G + Q P   L      G  + E L 
Sbjct: 63  SAHYL--SGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120

Query: 118 AVGNRHYGNIRQSASEWLERVEIGTD--RIDDQPRAFSGGMRQRLQIARNLVTSPRLVFM 175
                      Q A EWL +V I     +I+  P   SGG RQR+ IA  L+  P L+  
Sbjct: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180

Query: 176 DEPTGGLDVSVQARLLDLVRGLVNDLGLAVVVVTHDLAVARLLSHRMMVMKGGDVIEHGL 235
           DEPT  LDVSVQA++LDL++ L  +LG+A++ +THDL++ R ++ R+ VM+ G ++E   
Sbjct: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240

Query: 236 TDRVLDDPREPYTQLLVSS 254
              +   P  PYTQ L+++
Sbjct: 241 CHTLFAAPAHPYTQQLINA 259