Pairwise Alignments

Query, 258 a.a., ABC transporter, nucleotide binding/ATPase protein (phosphonate) from Agrobacterium fabrum C58

Subject, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (338), Expect = 2e-36
 Identities = 91/262 (34%), Positives = 137/262 (52%), Gaps = 21/262 (8%)

Query: 5   PLLKVRDVSKYY----GDRAGCRNVSFELYPGEVLAIVGESGSGKTTLLNCISTRLMP-- 58
           PL+ +R++   Y    GD   C NVSF+L PGEV  + GESG GK+T+   +     P  
Sbjct: 4   PLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPA 63

Query: 59  --TAGSVEYRMRDGSVRDLYHMGEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERL 116
             T G V +   D     L +  E  + F  + +   V Q+  + L   ++    + E+ 
Sbjct: 64  FITGGEVIFNGED----ILKYSDERMQAFRWK-EMSMVFQSAMNALNPVLT----MEEQF 114

Query: 117 MAVGNRHYGNIRQSASE----WLERVEIGTDRIDDQPRAFSGGMRQRLQIARNLVTSPRL 172
             V  RH    R+ A       LE V+I   R++D P  FSGGMRQRL IA  L  +P++
Sbjct: 115 CDVITRHTNMTREQAKRRAEGLLEIVDIHPSRLNDYPHQFSGGMRQRLVIAIALALNPKM 174

Query: 173 VFMDEPTGGLDVSVQARLLDLVRGLVNDLGLAVVVVTHDLAVARLLSHRMMVMKGGDVIE 232
           + MDEPT  LDV VQ  +L  +  L  + G +++ +THDL++    S R+ +M  G++IE
Sbjct: 175 IIMDEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIE 234

Query: 233 HGLTDRVLDDPREPYTQLLVSS 254
              + ++L+ P  PYT+ L SS
Sbjct: 235 VAPSKQILETPYHPYTKGLGSS 256