Pairwise Alignments

Query, 258 a.a., ABC transporter, nucleotide binding/ATPase protein (phosphonate) from Agrobacterium fabrum C58

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 2e-37
 Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 17/261 (6%)

Query: 5   PLLKVRDVSKYYGDR-----------AGCRNVSFELYPGEVLAIVGESGSGKTTLLNCIS 53
           PLLKV +V+  +  +               NVSF ++ GE   +VGESGSGK+T+   I+
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 54  TRLMPTAGSVEYRMRDGSVRDLYHMGEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVG 113
               P AG V +   D +     H    ERR L R     V QNP   +   +     + 
Sbjct: 361 GLYQPNAGRVTFEGIDLTALKSEH----ERRPLRR-QMQMVFQNPYTSMNPRMKIFDIIA 415

Query: 114 ERLMAVG-NRHYGNIRQSASEWLERVEIGTDRIDDQPRAFSGGMRQRLQIARNLVTSPRL 172
           E +      R     RQ  ++ LE V +G       P  FSGG RQR+ IAR L T PRL
Sbjct: 416 EPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRL 475

Query: 173 VFMDEPTGGLDVSVQARLLDLVRGLVNDLGLAVVVVTHDLAVARLLSHRMMVMKGGDVIE 232
           +  DEPT  LDVSVQA++L+L++ L ++L L ++ ++HDL V R +  R+ VM+ G ++E
Sbjct: 476 LICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLE 535

Query: 233 HGLTDRVLDDPREPYTQLLVS 253
              T+++  DP+  Y++ L+S
Sbjct: 536 VAPTEQLFTDPQHEYSKKLIS 556



 Score =  126 bits (317), Expect = 9e-34
 Identities = 86/265 (32%), Positives = 139/265 (52%), Gaps = 25/265 (9%)

Query: 6   LLKVRDVSKYYGDRAGC----RNVSFELYPGEVLAIVGESGSGKTTLLNCISTRLMP--T 59
           LL+V+++   Y  R G     ++++ ++  GE++ +VGESG+GK+T+ N +   L P  T
Sbjct: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 60  AGSVEYRMRDGSVRDLYHMGEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLMAV 119
               E  +    +  L      E R    +  GF+ Q+P   L    +    + E + A 
Sbjct: 63  IAGGEVYLNGEKISGLSPQAMREVR---GSKIGFIFQDPMTSLNPLFTVEHQLTETIHA- 118

Query: 120 GNRHYGNIRQSASEWLERV-----EIGT----DRIDDQPRAFSGGMRQRLQIARNLVTSP 170
                 N++ SA E  +R      ++G     +R+   P  FSGGMRQR+ IA  L   P
Sbjct: 119 ------NMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEP 172

Query: 171 RLVFMDEPTGGLDVSVQARLLDLVRGLVNDLGLAVVVVTHDLAVARLLSHRMMVMKGGDV 230
            L+  DEPT  LDVS+Q ++L+L+R L     +  ++VTHD+ V   ++ R+ VM  GD+
Sbjct: 173 DLIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDL 232

Query: 231 IEHGLTDRVLDDPREPYTQLLVSSI 255
           +E G T +VL  P  PYT+ L+S++
Sbjct: 233 VEFGPTAKVLGTPEHPYTRSLISAV 257