Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 361 a.a., DNA-binding domain-containing protein, AraC-type from Dechlorosoma suillum PS

 Score = 70.1 bits (170), Expect = 8e-17
 Identities = 82/348 (23%), Positives = 142/348 (40%), Gaps = 23/348 (6%)

Query: 1   MPEKRVSDEISVVAGLAAGVSNYARSRGIDIVPICKALDIDPATFSSLTERISLDRFSRL 60
           +P  R +  +  V G+ AGV+    +RG D  P+ +   I          R+ ++R++ L
Sbjct: 11  LPRPRATVAMGFVQGMLAGVT----ARGGDAGPLLERAGIGREVLHRPDVRVPVERYAAL 66

Query: 61  LETCALISGDDAFGLQCAATFPAGASGAFGYGLISAPTVRSFLRFLQDHVYYATNNSNFT 120
                   GD+ F L  +   P G        +ISAPT+   L+     +    ++ +  
Sbjct: 67  YNLLIAELGDEGFAL-FSTPLPPGTFEFLCRSVISAPTLGEALQRSTRFLGLVLHDLSVH 125

Query: 121 MVA-DATQVTLSWSFAPGIAKRDQYVDLSLAVLVQRLRDILGERVNQIE-IGLERQKPIN 178
           + +  A Q  L       +A    +    L  L+  L   L  R   +E +     +P +
Sbjct: 126 LESGSAGQALLRIREERPLAVGRVFAFEWLLRLLHGLASWLAGRSIVLERVQFPYPRPAH 185

Query: 179 IQLFKERLTRRVSFSQAIHTMRLPASLLDVANPNADERLFELMNLQCRMLRPETSADPTH 238
              +    T +  F+         A+LLD+     +  L   +         E S     
Sbjct: 186 ADDYALIYTAQSDFAADSLAASFSATLLDLPIRRDEAALASFL---------EGSPGKIT 236

Query: 239 FIDQVKRYMQMRLSDA------EL-SLGEIAPYFNLSERSFQRRLAELGTNLNEIKDAIR 291
            + +  R M +R+ D       EL  L  +A   NLS R+  RRL E G++   IKDA+R
Sbjct: 237 TLYRRDREMVLRVRDILRAALPELPDLDGVARQLNLSPRTLHRRLEEEGSSFRAIKDALR 296

Query: 292 KNAGFKLLVESDLPVSDISYRLGYSTPGAFSRSVSRWFGATPTDIRRK 339
           ++     L ++  P+  I+  LG++ P AF R+   W G +P+  R++
Sbjct: 297 RDLALSRLTKTSQPLGQIAADLGFADPSAFFRAFVSWTGTSPSQYRKR 344