Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 343 a.a., transcriptional regulator, AraC family protein from Marinobacter adhaerens HP15

 Score = 83.6 bits (205), Expect = 7e-21
 Identities = 67/295 (22%), Positives = 122/295 (41%), Gaps = 13/295 (4%)

Query: 51  RISLDRFSRLLETCALISGDDAFGLQCAATFPAGASGAFGYGLISAPT----VRSFLRFL 106
           R++  +  R++E    ++ DD  G++        A G  GY   S+P     + +F  FL
Sbjct: 51  RLNAHQQIRVIENALRLAEDDKLGVRIGRRLTPAAHGPLGYLACSSPNLLSAIEAFQAFL 110

Query: 107 QDHVYYATNNSNFTMVADATQVTLSWSFAPGIAKRDQYVDLSLAVLVQRLRDILGERVNQ 166
              + +   +          +  L     P +++     ++    L+     I+G   ++
Sbjct: 111 PTRISFVRLDRYIDHDHLIVRAILDAKMNPEVSRF--MAEICALTLLSCAEFIIGRPAHE 168

Query: 167 IEIGLERQKPINIQLFKERLTRRVSFSQAIHTMRLPASLLDVANPNADERLFELMNLQCR 226
           ++     + P     + + +  RV FS     +R+P +L +VAN +A    + L+  QC 
Sbjct: 169 VDTFFVHKDPGPAAGYADHIPGRVFFSSGELFVRVPMTLCEVANASASNESYALVREQCE 228

Query: 227 MLR---PETSADPTHFIDQVKRYMQMRLSDAELSLGEIAPYFNLSERSFQRRLAELGTNL 283
           ++    PE S      I+     M +     +L+    A    +S+R+  RRL   GT  
Sbjct: 229 IMLANLPEKSNTCWRKIE----IMMISSPAGQLTEDSAAAALFISKRTLARRLKREGTGF 284

Query: 284 NEIKDAIRKNAGFKLLVESDLPVSDISYRLGYSTPGAFSRSVSRWFGATPTDIRR 338
            EI+D I        L +  L +  ++  LGY    +F R+  RW+G TP   RR
Sbjct: 285 REIRDRILARQAGNYLKDRHLSIESVATLLGYHDGASFRRAFKRWYGITPDQYRR 339