Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 334 a.a., AraC family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 75/311 (24%), Positives = 132/311 (42%), Gaps = 16/311 (5%)

Query: 33  PICKALDIDPATFSSLTER--------------ISLDRFSRLLETCALISGDDAFGLQCA 78
           P+ +ALD   A    L E               + L R+    E  A + G+ A GL+  
Sbjct: 20  PVVRALDASGAQCDGLLEEFGMSRKLLSNPYEILPLTRYVAAFERAAEVVGESALGLRLG 79

Query: 79  ATFPAGASGAFGYGLISAPTVRSFLRFLQDHVYYATNNSNFTMVADATQVTLSWSFA-PG 137
           +       G  G   +S+PT+ + +R     +    N +   ++ D      ++  A P 
Sbjct: 80  SEVQLTELGPAGLVFLSSPTLNAAMRKFVLALASWQNTTTCELLRDDEWPIWTYQIASPQ 139

Query: 138 IAKRDQYVDLSLAVLVQRLRDILGERVNQIEIGLERQKPINIQLFKERLTRRVSFSQAIH 197
           I  R Q  + SL+ +   +R + G   N +E+  E   P++++ +       V F Q  +
Sbjct: 140 IWPRRQDAEYSLSTMCHMVRLVRGAAWNPVEVHFEHAAPVDLKPYARIFRVPVRFQQPFN 199

Query: 198 TMRLPASLLDVANPNADERLFELMNLQCRMLRPETSADPTHFIDQVKRYMQMRLSDAELS 257
            + L    LD +  +AD ++  +M      L     A P    +QV+  +  RL+  +L 
Sbjct: 200 GLILRPQDLDASLKSADSQMARMMERHATDLIAR-DAMPHSITEQVRDLVTRRLAREKLI 258

Query: 258 LGEIAPYFNLSERSFQRRLAELGTNLNEIKDAIRKNAGFKLLVESDLPVSDISYRLGYST 317
           + +IA    LS RS QR LA+ GT++ +I    R+ +   LL   +L  + I+  +GY+ 
Sbjct: 259 VADIAKDLGLSHRSLQRHLAQEGTSVRQIVREERQRSVEGLLEREELTNAAIARAVGYAD 318

Query: 318 PGAFSRSVSRW 328
                R+   W
Sbjct: 319 ATVLWRATRSW 329