Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 335 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 72/330 (21%), Positives = 136/330 (41%), Gaps = 6/330 (1%)

Query: 12  VVAGLAAGVSNYARSRGIDIVPICKALDIDPATFSSLTERISLDRFSRLLETCALISGDD 71
           V +G  A         G + + +     +  A F      I+  R + LLE  A      
Sbjct: 4   VRSGAVAQFEQLVLELGENPIEMIHQAGLRQAQFRDPNTYIAYPRLAELLEIAAQRCQHP 63

Query: 72  AFGLQCAATFPAGASGAFGYGLISAPTVRSFLRFLQDHVYYATNNSNFTMVADATQVTLS 131
            FGL  A        G     +  A TV   L  + D++Y   +  +  + +    V L+
Sbjct: 64  LFGLMLAQRQTLHVLGDLPMLVSRAATVADALARVNDYLYLHASGVSLQLQSQGEIVRLA 123

Query: 132 WSFAPGIAKR-DQYVDLSLAVLVQRLRDILGERVNQIEIGLERQKPINIQLFKERLTRRV 190
            S      +  +Q + +S+A L   +  +L   ++ + + L + KP   +   +RLT  V
Sbjct: 124 LSMNVHSPRGIEQLMQMSVAQLAMFVSSLLNINISNVPLYLCQNKPSEQE--SQRLTHSV 181

Query: 191 SFSQAIHTMRLPASLLDVANPNADERLFELMNLQCRMLRPETSADPTHFIDQVKRYMQMR 250
            F +  + + + AS L   N + +E L   +    + L+   S  P +  DQ +  +   
Sbjct: 182 RFREPFNGVVVKASQLTGRNYHDEEALNRHLQSHLQYLQ---SRYPDNLADQARDLIHRL 238

Query: 251 LSDAELSLGEIAPYFNLSERSFQRRLAELGTNLNEIKDAIRKNAGFKLLVESDLPVSDIS 310
           L   E  +  ++    L ER+ Q RL E G +  ++   +R+N   + L      +++++
Sbjct: 239 LPTGECCIERVSTALGLHERTLQTRLQETGQSYRQLLQDVRQNIAQQQLSYGTQTITELA 298

Query: 311 YRLGYSTPGAFSRSVSRWFGATPTDIRRKH 340
            +LGY+    FSR    W G +P   ++++
Sbjct: 299 LQLGYAEVAVFSRHFKTWTGFSPKQWQQQY 328