Pairwise Alignments

Query, 340 a.a., biopolymer transport protein from Agrobacterium fabrum C58

Subject, 317 a.a., tolQ protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 3/227 (1%)

Query: 110 MFMAADWVVKGVMIGLAFASLVTWTVWVAKSIELAGARVRAGSTLKVIRRAKTLAEATDA 169
           ++  A  V + VM  L   S+V+W++ V K++       R    +  +     +AEA   
Sbjct: 6   LYSHATPVARAVMAVLVVMSVVSWSIIVRKALLFRSIEGRLDGAIHRLEACDGIAEAMSR 65

Query: 170 VENKGGPAALMLRMATHEMQLSDAVVEHTDGGGIKERVSSALSRIETHAGRRMSRGTGAL 229
            +         L + T   +    +        I + V  A+         R+      L
Sbjct: 66  FKGHADNTVWHL-LRTGYREYMRLLPRRAPAEVIADNVRRAMRHAVAEETGRLGSQLPLL 124

Query: 230 ATIGSTAPFVGLFGTVWGIMNSFISISESQTTNLAVVAPGIAEALLATAIGLVAAIPAVV 289
           AT  +TAPF+GLFGTVWGIM++F  ++ ++T  +A VAPGI+EAL+ATA+GL  AIPA +
Sbjct: 125 ATTANTAPFIGLFGTVWGIMDAFHKLAGAKTAAIASVAPGISEALIATAVGLGVAIPAAI 184

Query: 290 IYNVFARSITGYRHLLADAAAGVERLVSRDLDFRRIPPGSTSKPAVS 336
            YN+    +   +  L   A      +   L+   +P     KP  +
Sbjct: 185 GYNLHMTRVRRVQARLISLAGLTLNTIM--LETAPLPAAENGKPTAT 229