Pairwise Alignments

Query, 212 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

 Score = 79.7 bits (195), Expect = 4e-20
 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 4/196 (2%)

Query: 7   LDYAGVAVFAATGALAASRKQLDLIGFLFFAAATGIGGGTVRDLVLGRTPVFWVINPTYI 66
           ++  G+  FA  GAL   +K LDL+G +     T +GGG  RDL++   P + + +P  +
Sbjct: 10  MNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIP-YALRSPNDM 68

Query: 67  ---LVCVSVAVLLFFTAHLFESRYRVLIWLDALGLSAYCVMGAAKGLAASGSATVAIVTG 123
              L+ V  A+++F   +   S   ++   DA+GLSA+   GA        S    I+  
Sbjct: 69  GVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILA 128

Query: 124 VLTATFGGVLRDIMAGEPSVLLRPEIYITCALLGSSIFIVVYFFGAPLYAASAAGFLTAF 183
            LT   GG++ DI+  +    L  + Y +C+++G+  F +       L  ++    +   
Sbjct: 129 TLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICSIVVL 188

Query: 184 CVRSGALIFGWTFPPY 199
            +R  A++  W+ P +
Sbjct: 189 MIRIVAILCKWSLPKF 204