Pairwise Alignments

Query, 667 a.a., cytochrome O ubiquinol oxidase subunit I from Agrobacterium fabrum C58

Subject, 662 a.a., cytochrome-c oxidase (RefSeq) from Shewanella loihica PV-4

 Score =  879 bits (2270), Expect = 0.0
 Identities = 407/659 (61%), Positives = 514/659 (77%), Gaps = 2/659 (0%)

Query: 8   TSFLFGKLTWESIPLHEPILVATFAAVALGGIVVVGALTYFRLWGYLWNEWFTSIDHKKI 67
           +SFL GKLT +++P HEPI++ T AAVA+ G+V+   +T  + WG LW +W TS+DHK++
Sbjct: 2   SSFL-GKLTLDAVPFHEPIIMVTLAAVAVIGLVIAALITKHKKWGPLWRDWLTSVDHKRL 60

Query: 68  GIMYIILALVMLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFFMAMP 127
           GIMYI+LA VML+RGF+DAIMMR QQA+A+ G+ GYLPP HYDQIFTAHGVIMI FMAMP
Sbjct: 61  GIMYILLAFVMLIRGFSDAIMMRTQQAMATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMP 120

Query: 128 MITGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIITMISLFVGEYAQTGWLAYPPLS 187
            + GLMN V+PLQIGARDV+FPFLNN SFW+T +GA++  ISL VGE+A+TGW+AYPPLS
Sbjct: 121 FMIGLMNLVLPLQIGARDVAFPFLNNLSFWLTASGAVLINISLGVGEFAKTGWVAYPPLS 180

Query: 188 GIDGSPGVGVDYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRMPIFVWTSLCSNI 247
            +  SPGVGVDYYIW LQI+G+GTTL+G+N +VT++KMRAPGM +M+MPIF WT   +NI
Sbjct: 181 ELAYSPGVGVDYYIWALQISGIGTTLTGVNFLVTVLKMRAPGMKLMQMPIFTWTCTWANI 240

Query: 248 LIVASFPILTATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGI 307
           LIVASFPILTA LA+LTLDRY   +FFTN+ GGN MMY+NL W WGHPEVYIL+LPAFGI
Sbjct: 241 LIVASFPILTAVLAMLTLDRYMDFHFFTNEGGGNAMMYINLFWAWGHPEVYILILPAFGI 300

Query: 308 FSEIVATFSGKRLFGYASMVYATAVITILSYLVWLHHFFTMGSGANVNAFFGITTMIISI 367
           FSE+++TF+ KRLFGY SMV+A+  I+IL ++VWLHHFFTMGS ANVNAFFG+ TM+I++
Sbjct: 301 FSEVISTFTAKRLFGYKSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAV 360

Query: 368 PTGAKIFNWLFTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLI 427
           PTG K+FNWLFT+Y+GR+K  VP+LWT+GFM+TF IGGMTGVLLAVP AD+VLHNSLFLI
Sbjct: 361 PTGVKLFNWLFTIYRGRLKLTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLI 420

Query: 428 AHFHNTIIGGVVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYFAFMPLYILGLM 487
           AHFHNTIIGG VFG LAG  +WFPKA G+ L+   GK +FW W  GFY AFMPLY+LG +
Sbjct: 421 AHFHNTIIGGAVFGYLAGFAFWFPKATGFHLNERLGKAAFWCWQAGFYVAFMPLYVLGFL 480

Query: 488 GITRRISQFEDNSLQIWFVIAAFGAFLIALGIASFIIQLIVSFLKRDQLRDVTGDPYNAR 547
           G+TRR++Q ++     W  +AA GA +I +GI    +QL VS   R+Q RD TGDP+N  
Sbjct: 481 GMTRRLNQTDNPDWNFWIYLAAVGACIIFVGIVLQFVQLYVSIRDREQNRDTTGDPWNGH 540

Query: 548 TLEWSTSSPPPQYNFAFTPVIHDVDAWHDMKKRGYSRPL-DGFIPIHMPKNTGAGVIISA 606
           TLEWST+SPP  YNFA  P + D+DA+   K++G +  + + + PIHMPKNTG GV ++ 
Sbjct: 541 TLEWSTASPPQFYNFARLPKVVDIDAFTHAKEQGQAYQMQESYQPIHMPKNTGHGVWMAL 600

Query: 607 ISVVLGFALVWHIWWLAALSFIGVIAVSIAHTFNYNRDYYIPASDVSTVEAERTKLLAK 665
                GFA +WHI WLA   F+G   V +   ++ + DYY+   +V  +E      L+K
Sbjct: 601 GITAAGFAAIWHILWLAIAGFLGAFIVFLMRAYDTDTDYYVQGDEVKRIETAHLNNLSK 659