Pairwise Alignments

Query, 323 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

Subject, 368 a.a., Nucleoside ABC transporter, permease protein 1 from Pseudomonas fluorescens FW300-N2E2

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 38/300 (12%)

Query: 18  TIPLLFTALAGLFSERAGVFDIGLEGKMLAAAFASACVAYL---TANPWAG---LLAGIG 71
           T+P+L  AL    + +A +++IG EG++L  A A + +A       + WA    LL G  
Sbjct: 67  TLPILLCALGLAVAYQARIWNIGAEGQLLLGALAGSALAVNIIDVQSRWALVLILLTGTL 126

Query: 72  VSILFSLIHGFAVITNRGNQIVSGVALNFIAAGLTV--VLGQAWFGQGGRTPQ--LPGEG 127
               ++ +  +       N+I++ + LN+IA  L +  V G      G   P+  + GE 
Sbjct: 127 AGAAWAGLTAWLRTRFNANEILTSIMLNYIALNLLLFCVHGPLKDPAGFNFPESAMFGEA 186

Query: 128 RFAPIILPGADAMREVPFIGPLYANVISGNNILTYLAFLAVPLSWWVLYRTRFGLRLRAV 187
              P++L            G ++A +        Y A LA+   W +L ++  G +++ +
Sbjct: 187 SRLPLLLED----------GRVHAGL--------YFALLALVAVWVLLQKSFVGFQIKVL 228

Query: 188 GENPGAVDTAGISVTWMRYRAVIVAGFLCGFSGAYLAVAQSAAFIANMSAGKGYIALAAL 247
           G +  A   AG     + + A++++G L G +G           +  +S G GY A+   
Sbjct: 229 GLDARAAGFAGFRQKPLVWLALLISGALAGLAGVCEVTGPIGQLVPQVSPGYGYAAITVA 288

Query: 248 IFAKWKPVPVMFACLLFGFLDAFANFMQGKSVP---GIGEVPVQIFQAMP--YILTCILL 302
              +  P+ ++F+ LL   L     ++ G+S      + +   Q+FQ M   ++L C +L
Sbjct: 289 FLGRLNPIGILFSSLLMALL-----YIGGESAQMSLNLPQAITQLFQGMMLFFLLACDVL 343